Preponderance of antibiotic-resistant bacteria associated with partially damaged tomato (Solanum lycopersicum L.) obtained from local markets in Southwest Nigeria

Authors

DOI:

https://doi.org/10.14719/pst.3736

Keywords:

antibiotic resistance, bacteria, spoilage microorganisms, 16S rRNA, tomato

Abstract

Ripened tomato fruits tend to rapidly deteriorate after harvest due to the physiological activities of plant hormones and their naturally high-water content, which makes them susceptible to spoilage by microorganisms. This study was therefore carried out to isolate, characterize and identify pathogenic bacteria associated with partially rotten tomato fruits. Partially rotten tomato fruit samples were sourced from local markets in Southwest Nigeria and subjected to bacterial analysis. The level of susceptibility of the bacteria isolates to commonly used ?-lactamase antibiotics was evaluated via the disc diffusion method. The bacterial isolates with the highest resistance to all the antibiotics tested were selected for molecular characterization using 16S rRNA gene profiling. Forty-two bacterial isolates were obtained from the tomato samples, namely Bacillus spp. (26.19%), Klebsiella spp. (16.67%), Serratia spp. (14.29%), Citrobacter spp. (14.29%), Staphylococcus spp. (7.14%), Pseudomonas spp. (4.76%), Micrococcus spp. (4.76%), Enterobacter spp. (4.76%), Providencia sp. (2.38%), Proteus sp. (2.38%) and Salmonella sp. (2.38%). The highest level of antibiotic resistance of the bacterial isolates was against Ciprofloxacin (10 ?g) at 100%, followed by Zinnacef (20 ?g) at 72.77%, while the highest susceptibility was against Streptomycin (30 ?g) at 94.74%. Using phylogenetic analysis of their 16S rRNA gene sequence, three bacteria that were resistant to every single drug tested were identified as Klebsiella pneumoniae, Enterobacter asburiae and Enterobacter cloacae. This study shows that antibiotic-resistant bacteria are present in partially damaged tomatoes; thus, consumption of improperly cooked tomatoes could pose a significant public health risk.

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References

Kung’u JB. Food security in Africa: The challenges of researchers in the 21st century. In: Bationo, A. (eds.). Advances in Integrated Soil Fertility Management in Sub-Saharan Africa: Challenges and Opportunities, Springer. 2007; 105-13. https://doi.org/10.1007/978-1-4020-5760-1_8

Adebayo PF, Ojo EO. Food security in Nigeria: An overview. European Journal of Sustainable Development. 2012;1(2):199. https://doi.org/10.14207/ejsd.2012.v1n2p199

FAO, ECA, AUC. Africa regional overview of food security and nutrition 2019 - In brief. Rome; 2020.

Babalola DA, Makinde YO, Omonona BT, Oyekanmi MO. Determinants of post-harvest losses in tomato production: A case study in Imeko-Afon local government area of Osun state. Journal of Life and Physical Science. 2010;3(2):23-27.

Ayandiji A, Adeniyi OD, Omidiji D. Determinant post-harvest losses among tomato farmers in Imeko-Afon local government area of Ogun state, Nigeria. Global Journal of Science Frontier Research. 2011;11(5):23-27.

Ghosh A. Identification of microorganisms responsible for spoilage of tomato (Lycopersicum esculentum) fruit. Journal of Phytology. 2009;1(6):414-16. http://www.scopemed.org/?mno=192987.

Obeng FA, Gyasi PB, Olu-Taiwo M, Patrick AF. Microbial assessment of tomatoes (Lycopersicon esculentum) sold at some central markets in Ghana. BioMed Research International. 2018;7 pp. https://doi.org/10.1155/2018/6743826

Baiyewu RA, Amusa NA, Ayoola OA, Babalola OO. Survey of the post-harvest diseases and aflatoxin contamination of marketed pawpaw fruit (Carica papaya L.) in southwestern Nigeria. African Journal of Agricultural Science. 2007;2(4):178-81.

Erhirhie EO, Omoirri MA, Chikodiri SC, Ujam TN, Emmanuel KE, Oseyomon JO. Microbial quality of fruits and vegetables in Nigeria: A review. Intl J Nut Sci. 2020;5(3):2-11.

Serwecinska L. Antimicrobials and antibiotic-resistant bacteria: A risk to the environment and public health. Water. 2020;2:3313. doi:10.3390/w12123313

Ajayi-Odoko OA. Molecular characterization of ESBL, Carbapenemase and AmpC B-lactamase-producing gram-negative bacteria in wastewater from selected hospitals in Ibadan, Nigeria. Unpublished PhD Thesis, Submitted to Department of Microbiology, College of Agriculture, Engineering and Science, Bowen University, Iwo-Nigeria. 2023.

Oli AN, Eze DE, Gugu TH, Ezeobi I, Maduagwu TH, Ihekwereme CP. Multi-antibiotic resistant extended-spectrum beta-lactamase-producing bacteria pose a challenge to the effective treatment of wound and skin infections. Pan African Medical Journal. 2017;27:66. doi:10.11604/pamj.2017.27.66.10226.

Adeleke OA, Owoseni AA. Antibiotic resistance and presence of plasmids in bacteria isolated from cooked street foods. International Journal of Environmental Studies. 2022; doi: 10.1080/00207233.2022.2111149

Bauer AW, Kirby WM, Sherris JC, Turck M. Antibiotic susceptibility testing by a standardized disk method. Am J Clin Pathol. 1966;45:439-96. https://doi.org/10.1093/ajcp/45.4_ts.493

Clinical and Laboratory Standards (CLSI). Performance standards for antimicrobial susceptibility testing. 30th ed. CLSI supplement M100 (Wayne: Clinical and Laboratory Standards Institute). 2020.

Queipo-Ortuño MI, De Dios Colmenero J, Macias M, Bravo MJ, Morata P. Preparation of bacterial DNA template by boiling and effect of immunoglobulin G as an inhibitor in real-time PCR for serum sample from patients with Brucellosis. Clin Vaccine Immunol. 2008;15:293-96. https://doi.org/10.1128/CVI.00270-07

Frank JA, Reich CI, Sharma S, Weisbaum JS, Wilson BA, Olsen GJ. Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes. Applied and Environmental Microbiology. 2008;74(8):2461-70. doi:10.1128/AEM.02272-07

Lee PY, Costumbrado J, Hsu CY, Kim YH. Agarose gel electrophoresis for the separation of DNA fragments. Journal of Visualized Experiments. 2012;20(62):3923. https://doi.org/10.3791/3923-v

Edgar RC. MUSCLE: A multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics. 2004;5(1):113. doi:10.1186/1471-2105-5-113

Huelsenbeck JP, Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 2001;17(8):754-55. doi:10.1093/bioinformatics/17.8.754.

Hasegawa M, Kishino K, Yano T. Dating the human-ape splitting by a molecular clock of mitochondrial DNA. J Mol Evol. 1985;22:160-74. https://doi.org/10.1007/BF02101694

Oyeku OG, Mandal SK. Taxonomy and okadaic acid production of a strain of Prorocentrum lima (Dinophyceae) isolated from the Bay of Bengal, North Indian Ocean. Toxicon. 2021;196:32-43. https://doi.org/10.1016/j.toxicon.2021.03.017.

Kim J, Jeon S, Rhie H, Lee B, Park M, Lee H, et al. Rapid detection of extended-spectrum ?-lactamase (ESBL) for Enterobacteriaceae by use of a multiplex PCR-based method. Infection and Chemotherapy. 2009;41(3):181-84. https://doi.org/10.3947/ic.2010.42.3.181

Etebu E, Nwauzoma AB, Bawo DDS. Postharvest spoilage of tomato (Lycopersicon esculentum Mill.) and control strategies in Nigeria. Journal of Biology, Agriculture and Healthcare. 2013;3(10):51-61.

Oviness M, Chinkuli KM, Seter S, Mubbunu L. Isolation, identification and characterization of bacteria from ripe tomatoes grown under different agronomic conditions. Asian Pacific Journal of Health Science. 2017;4(3):139-50. https://doi.org/10.21276/apjhs.2017.4.3.23

Beuchat LR. Vectors and conditions for pre-harvest contamination of fruits and vegetables with pathogens capable of causing enteric diseases. Britain Food Journal. 2006;108:38-53. https://doi.org/10.1108/00070700610637625

Abdulsalam RA, Ijabadeniyi OA, Cason ED, Sabiu S. Characterization of microbial diversity of two tomato cultivars through targeted next-generation sequencing 16S rRNA and ITS techniques. Microorganisms. 2023;11:2337. https://doi.org/10.3390/ microorganisms11092337

Al-Kharousi ZS, Guizani N, Al-Sadi A, Al-Bulush IM. Antibiotic resistance of Enterobacteriaceae isolated from fresh fruits and vegetables and characterization of their AmpC ?-Lactamases. Journal of Food Protection. 2019;82(11):1857-63. https://doi.org/10.4315/0362-028X.JFP-19-089

Corona F, Martinez JL. Phenotypic resistance to antibiotics. Antibiotics (Basel). 2013;18 (2):237-55. https://doi.org/10.3390/antibiotics2020237

Published

17-02-2025 — Updated on 25-02-2025

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1.
Omotayo OE, Faniyi FB, Akinola OT, Oyeku OG. Preponderance of antibiotic-resistant bacteria associated with partially damaged tomato (Solanum lycopersicum L.) obtained from local markets in Southwest Nigeria. Plant Sci. Today [Internet]. 2025 Feb. 25 [cited 2025 Mar. 30];12(1). Available from: https://horizonepublishing.com/journals/index.php/PST/article/view/3736

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