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Research Articles

Early Access

Effects of submergence time, light and nitrate compounds on the survival of some modern rice cultivars under flooded conditions

DOI
https://doi.org/10.14719/pst.11416
Submitted
22 August 2025
Published
03-02-2026

Abstract

Flooding significantly affects rice survival due to fast oxygen depletion, and the possible use of nitrate (NO3-) as an alternate terminal electron acceptor to enable anaerobic metabolism remains little investigated. In particular, the efficiency of different NO3 - compounds in increasing submergence tolerance across different rice cultivars has received little attention. Six rice cultivars-OM4900, OM6976, OM4218, IR50404, OM7347 and IR64Sub1-were tested for their flooding responses during 5-10 and 15-day submergence periods in dark conditions. Additionally, the effects of exogenous NO3 - treatments on seedling survival were evaluated. After 5 days, IR64Sub1, OM7347 and OM4900 exhibited the highest survival rates (86, 83 and 81 %, respectively). Survival sharply decreased after 10 days, with most cultivars falling below 26 %, except OM7347 and IR64Sub1, which were reduced to 38.7 and 30.7 %, respectively. At 15 days, survival was ≤10 % for all lines. Light significantly improved survival (72.91 %) compared with dark conditions (12.31 %), and darkness induced a 142.252 % increase in soluble sugar levels, demonstrating the importance of carbohydrate reserves under hypoxia. Application of 3 mg L-1 calcium nitrate (Ca(NO3)2) increased survival after 10-day submergence by 47.7 % in OM4218, 53 % in OM4900, and 40 % in IR64Sub1, while silver nitrate (AgNO3) stimulated shoot elongation (up to 4.42 cm). Calcium nitrate also increased soluble sugar accumulation to 2.91.5.31 mg g-1 dry weight (DW). Dissolved oxygen measurements showed delayed oxygen depletion under Ca(NO3)2 and elevated oxygen availability with AgNO3. These results highlight the novel role of NO3 - compounds in enhancing rice submergence tolerance and provide a foundation for further elucidation of NO3- mediated mechanisms of anaerobic survival.

References

  1. 1. Kaur G, Singh G, Motavalli PP, Nelson KA, Orlowski JM, Golden BR. Impacts and management strategies for crop production in waterlogged or flooded soils: A review. Agronomy Journal. 2020;112(3):1475–501. https://doi.org/10.1002/agj2.20093
  2. 2. Oladosu Y, Rafii MY, Arolu F, Chukwu SC, Muhammad I, Kareem I, et al. Submergence tolerance in rice: Review of mechanism, breeding and, future prospects. Sustainability. 2020;12(4):1632. https://doi.org/10.3390/su12041632
  3. 3. Khalil MI, Hassan MM, Samanta SC, Chowdhury AK, Hassan MZ, Ahmed NU, et al. Unraveling the genetic enigma of rice submergence tolerance: Shedding light on the role of ethylene response factor-encoding gene SUB1A-1. Plant Physiol Biochem. 2024;206:108224. https://doi.org/10.1016/j.plaphy.2023.108224
  4. 4. Hussain W, Anumalla M, Ismail AM, Walia H, Singh VK, Kohli A, et al. Revisiting FR13A for submergence tolerance: Beyond the SUB1A gene. J Exp Bot. 2024;75(18):5477–83. https://doi.org/10.1093/jxb/erae299
  5. 5. Anumalla M, Khanna A, Catolos M, Ramos J, Sta. Cruz MT, Venkateshwarlu C, et al. Future flooding tolerant rice germplasm: Resilience afforded beyond Sub1A gene. Plant Genome. 2025;18(2):e70040. https://doi.org/10.1002/tpg2.70040
  6. 6. Timilsina A, Dong W, Hasanuzzaman M, Liu B, Hu C. Nitrate–nitrite–nitric oxide pathway: A mechanism of hypoxia and anoxia tolerance in plants. Int J Mol Sci. 2022;23(19):11522. https://doi.org/10.3390/ijms231911522
  7. 7. Gupta KJ, Kaladhar VC, Fitzpatrick TB, Fernie AR, Møller IM, Loake GJ. Nitric oxide regulation of plant metabolism. Mol Plant. 2022;15(2):228–42. https://doi.org/10.1016/j.molp.2021.12.012
  8. 8. Hesari N, Mirmazloum I, Jäger K, Kolozs H, Kiss-Bába E, Ramos MES, et al. Nitric oxide mediates nitrate induced alleviation of waterlogging stress in cucumber. Sci Rep. 2025;15(1):15307. https://doi.org/10.1038/s41598-025-00321-x
  9. 9. Gupta S, Kaur N, Kant K, Jindal P, Ali A, Naeem M. Calcium: A master regulator of stress tolerance in plants. J Exp Bot. 2023;163:580–94. https://doi.org/10.1016/j.sajb.2023.10.047
  10. 10. Ishfaq M, Wang Y, Yan M, Wang Z, Wu L, Li C, et al. Physiological essence of magnesium in plants and its widespread deficiency in the farming system of China. Front Plant Sci. 2022;13:802274. https://doi.org/10.3389/fpls.2022.802274
  11. 11. Kumar V, Parvatam G, Ravishankar GA. AgNO3: A potential regulator of ethylene activity and plant growth modulator. Electron J Biotechnol. 2009;12(2):8-23. https://doi.org/10.2225/vol12-issue2-fulltext-1
  12. 12. Bailey-Serres J, Lee SC, Brinton E. Waterproofing crops: Effective flooding survival strategies. Plant Physiol. 2012;160(4):1698–709. https://doi.org/10.1104/pp.112.208173
  13. 13. Sakagami JI, Joho Y, Ito O. Contrasting physiological responses by cultivars of Oryza sativa and O. glaberrima to prolonged submergence. Ann Bot. 2009;103(2):171–80. https://doi.org/10.1093/aob/mcn201
  14. 14. Das KK, Panda D, Sarkar RK, Reddy JN, Ismail AM. Submergence tolerance in relation to variable floodwater conditions in rice. Environ Exp Bot. 2009;66(3):425–34. https://doi.org/10.1016/j.envexpbot.2009.02.015
  15. 15. Dubois M, Gilles K, Hamilton JK, Rebers PA, Smith F. A colorimetric method for the determination of sugars. Nature. 1951;168(4265):167. https://doi.org/10.1038/168167a0
  16. 16. Zhan X, Zhu Y. Abiotic stress and mechanisms of stress tolerance in vegetable crops. In: Ahammed GJ, Zhou J, editors. Growth regulation and quality improvement of vegetable crops. Singapore: Springer; 2025. p. 183-224. https://doi.org/10.1007/978-981-96-0169-1_8
  17. 17. Basu S, Monika, Kumari S, Kumar G. Sub1 QTL confers submergence tolerance in rice through nitro-oxidative regulation and phytohormonal signaling. Plant Physiol Biochem. 2024;211:108682. https://doi.org/10.1016/j.plaphy.2024.108682
  18. 18. Wang M, Kuang N, Mao Z, Zhou S, Liu Z, Chen K, et al. Sprouting enhances submergence tolerance in rice by promoting glutathione biosynthesis and turnover. Antioxidants. 2025;14(12):1387. https://doi.org/10.3390/antiox14121387
  19. 19. Panda D, Barik J, Sarkar RK. Recent advances of genetic resources, genes and genetic approaches for flooding tolerance in rice. Curr Genomics. 2021;22(1):41–58. https://doi.org/10.2174/1389202922666210114104140
  20. 20. Oh M, Nanjo Y, Komatsu S. Gel-free proteomic analysis of soybean root proteins affected by calcium under flooding stress. Front Plant Sci. 2014;5:559. https://doi.org/10.3389/fpls.2014.00559
  21. 21. Wang X, Komatsu S. Proteomic analysis of calcium effects on soybean root tip under flooding and drought stresses. Plant Cell Physiol. 2017;58(8):1405–20. https://doi.org/10.1093/pcp/pcx078
  22. 22. Mei J, Wang W, Peng S, Nie L. Seed pelleting with calcium peroxide improves crop establishment of direct-seeded rice under waterlogging conditions. Sci Rep. 2017;7(1):4878. https://doi.org/10.1038/s41598-017-04966-1
  23. 23. Huang YC, Yeh TH, Yang CY. Ethylene signaling involves in seeds germination upon submergence and antioxidant response elicited confers submergence tolerance to rice seedlings. Rice. 2019;12:23. https://doi.org/10.1186/s12284-019-0284-z
  24. 24. Hartman S, Sasidharan R, Voesenek LACJ. The role of ethylene in metabolic acclimations to low oxygen. New Phytologist. 2021;229(1):64–70. https://doi.org/10.1111/nph.16378

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