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Review Articles

Vol. 13 No. sp2 (2026): Recent Advances in Agriculture

Microbe mediated drought stress mitigation: A review

DOI
https://doi.org/10.14719/pst.11478
Submitted
26 August 2025
Published
18-05-2026

Abstract

Drought is one of the most critical abiotic stresses limiting crop growth, productivity and yield by adversely affecting essential physiological and biochemical processes, including seed germination, photosynthesis, nutrient uptake, osmotic regulation and cellular homeostasis. The increasing frequency and severity of water-deficit conditions due to climate change necessitates the development of sustainable strategies to enhance plant drought tolerance. Beneficial microorganisms have emerged as key contributors to improving plant resilience under drought stress by facilitating water and nutrient acquisition, reinforcing antioxidant defense systems and regulating stress-responsive pathways. Plant growth-promoting rhizobacteria, endophytic bacteria and fungi, including arbuscular mycorrhizal fungi (AMF), play a vital role in mitigating drought through multiple mechanisms such as osmolyte accumulation, activation of antioxidant enzymes, modulation of phytohormone levels, degradation of stress-induced ethylene via 1-aminocyclopropane-1-carboxylic acid deaminase (ACCD), exopolysaccharide production, emission of volatile organic compounds (VOCs) and alteration of root system architecture. Application of microbial inoculants has consistently demonstrated improvements in plant growth, water-use efficiency and yield stability under water-limited conditions. Integrating beneficial microbes into crop management practices offers a sustainable, eco-friendly and cost-effective strategy for climate-resilient agriculture, reducing dependency on chemical inputs while ensuring productivity and food security under increasingly arid and unpredictable environmental conditions.

References

  1. 1. FSIN. Global report on food crises 2024 [Internet]. Rome: Food Security Information Network; 2024 [cited 2024 Aug 12]. Available from: https://www.fsinplatform.org/report/global-report-foodcrises-2024/
  2. 2. Malhi GS, Kaur M, Kaushik P. Impact of climate change on agriculture and its mitigation strategies: A review. Sustainability. 2021;13(3):1318. https://doi.org/10.3390/su13031318
  3. 3. Lata R, Chowdhury S, Gond SK, White Jr JF. Induction of abiotic stress tolerance in plants by endophytic microbes. Lett Appl Microbiol. 2018;66(4):268–76. https://doi.org/10.1111/lam.12855
  4. 4. Cohen I, Zandalinas SI, Huck C, Fritschi FB, Mittler R. Meta-analysis of drought and heat stress combination impact on crop yield and yield components. Physiol Plant. 2021;171(1):66–76. https://doi.org/10.1111/ppl.13203
  5. 5. Ahmed K, Shabbir G, Ahmed M. Exploring drought tolerance for germination traits of diverse wheat genotypes at seedling stage: A multivariate analysis approach. BMC Plant Biol. 2025;25(1):390. https://doi.org/10.1186/s12870-025-06345-9
  6. 6. Chieb M, Gachomo EW. The role of plant growth promoting rhizobacteria in plant drought stress responses. BMC Plant Biol. 2023;23(1):407. https://doi.org/10.1186/s12870-023-04403
  7. 7. Farooq M, Wahid A, Kobayashi N, Fujita D, Basra SMA. Plant drought stress: Effects, mechanisms and management. In: Lichtfouse E, Navarrete M, Debaeke P, Souchère V, Alberola C, editors. Sustainable agriculture. Dordrecht: Springer; 2009. p. 2009. https://doi.org/10.1007/978-90-481-2666-8_12
  8. 8. Garg BK. Nutrient uptake and management under drought: Nutrient-moisture interaction. Curr Agric. 2003;27(1–2):1–8.
  9. 9. Munne-Bosch S, Penuelas J. Photo-and antioxidative protection and a role for salicylic acid during drought and recovery in field grown Phillyrea angustifolia plants. Planta. 2003;217(5):758–66. https://doi.org/10.1007/s00425-003-1037-0
  10. 10. Khan Z, Rho H, Firrincieli A, Hung SH, Luna V, Masciarelli O, et al. Growth enhancement and drought tolerance of hybrid poplar upon inoculation with endophyte consortia. Curr Plant Biol. 2016;6:38–47. https://doi.org/10.1016/j.cpb.2016.08.001
  11. 11. Ramakrishna W, Yadav R, Li K. Plant growth promoting bacteria in agriculture: Two sides of a coin. Appl Soil Ecol. 2019;138:10–18. https://doi.org/10.1016/j.apsoil.2019.02.019
  12. 12. Kaushal M, Wani SP. Plant-growth-promoting rhizobacteria: Drought stress alleviators to ameliorate crop production in drylands. Ann Microbiol. 2016;66(1):35–42. https://doi.org/10.1007/s13213-015-1112-3
  13. 13. Lareen A, Burton F, Schafer P. Plant root-microbe communication in shaping root microbiomes. Plant Mol Biol. 2016;90(6):575–87. https://doi.org/10.1007/s11103-015-0417-8
  14. 14. Eid AM, Salim SS, Hassan SED, Ismail MA, Fouda A. Role of endophytes in plant health and abiotic stress management. In: Kumar, V, Prasad R, Kumar M, Choudhary DK, editors. Microbiome in plant health and disease: Challenges and opportunities. Singapore: Springer; 2019. p. 119–44. https://doi.org/10.1007/978-981-13-8495-0_6
  15. 15. Ahmad F, Ahmad I, Khan MS. Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities. Microbiol Res. 2008;163(2):173–81. https://doi.org/10.1016/j.micres.2006.04.001
  16. 16. Wankhade A, Wilkinson E, Britt DW, Kaundal A. A review of plant–microbe interactions in the rhizosphere and the role of root exudates in microbiome engineering. Appl Sci. 2025:15(13):7127. https://doi.org/10.3390/app15137127
  17. 17. Salman M, Javed MR, Tariq A, Usama M, Hanif HI, Sadia B, et al. Endophyte bacterial metabolites: An active syrup for improvement of growth, biomass and antioxidant system of Zea mays L. in drought condition. J Plant Growth Regul. 2025;1(1):1–16. https://doi.org/10.1007/s00344-025-11660-4
  18. 18. Karimian A, Bahramnejad B, Siosemardeh A, Salehi H, Ahmad NS. Boosting drought resilience: The role of endophytic Bacillus safensis in enhancing melatonin production in chickpea cultivars. BMC Plant Biol. 2025;25(1):789. https://doi.org/10.1186/s12870-025-06830-1
  19. 19. Kondo T, Sibponkrung S, Tittabutr P, Boonkerd N, Ishikawa S, Teaumroong N, et al. Bacillus velezensis S141 improves the root growth of soybean under drought conditions. Biosci Biotechnol Biochem. 2025;89(2):304–12. https://doi.org/10.1093/bbb/zbae168
  20. 20. Shaffique S, Imran M, Injamum-Ul-Hoque M, Zainurin N, Peter O, Alomrani SO, et al. Unraveling the new member Bacillus pumilus SH -9 of Bacillaceae family and its potential role in seed biopriming to mitigate drought stress in Oryza sativa. Plant Stress. 2024;11:100318. https://doi.org/10.1016/j.stress.2023.100318
  21. 21. Cui G, Ma X, Lang D, Zhou L, Bai Q, Zhang W, et al. Mechanism of Bacillus pumilus cooperating with silicon to restore carbon metabolism of Glycyrrhiza uralensis Fisch. seedlings exposed to drought stress. Ind Crops Prod. 2024;221:119422. https://doi.org/10.1016/j.indcrop.2024.119422
  22. 22. Rajkumar M, Narayanasamy S, Uthandi S. Apoplast-associated Bacillus amyloliquefaciens LAS10 for plant growth promotion and drought stress tolerance in little millet (Panicum sumatransae). Plant Stress. 2024;11:100340. https://doi.org/10.1016/j.stress.2023.100340
  23. 23. Filgueiras L, Silva R, Almeida I, Vidal M, Baldani JI, Meneses CHSG. Gluconacetobacter diazotrophicus mitigates drought stress in Oryza sativa L. Plant Soil. 2020;451(1–2):57–73. https://doi.org/10.1007/s11104-019-04163-1
  24. 24. Vigani G, Rolli E, Marasco R, Dell'Orto M, Michoud G, Soussi A, et al. Root bacterial endophytes confer drought resistance and enhance expression and activity of a vacuolar H+‐pumping pyrophosphatase in pepper plants. Environ Microbiol. 2019;21(9):3212–28. https://doi.org/10.1111/1462-2920.14272
  25. 25. Eswaran SUD, Sundaram L, Perveen K, Bukhari NA, Sayyed RZ. Osmolyte-producing microbial biostimulants regulate the growth of Arachis hypogaea L. under drought stress. BMC Microbiol. 2024;24(1):165. https://doi.org/10.1186/s12866-024-03320-6
  26. 26. Murali M, Singh SB, Gowtham HG, Shilpa N, Prasad M, Aiyaz M, et al. Induction of drought tolerance in Pennisetum glaucum by ACC deaminase producing PGPR-Bacillus amyloliquefaciens through antioxidant defense system. Microbiol Res. 2021;253:126891. https://doi.org/10.1016/j.micres.2021.126891
  27. 27. Akhtar SS, Amby DB, Hegelund JN, Fimognari L, Großkinsky DK, Westergaard JC, et al. Bacillus licheniformis FMCH001 increases water use efficiency via growth stimulation in both normal and drought conditions. Front Plant Sci. 2020;11:297. https://doi.org/10.3389/fpls.2020.00297
  28. 28. Carlson R, Tugizimana F, Steenkamp PA, Dubery IA, Hassen AI, Labuschagne N. Rhizobacteria-induced systemic tolerance against drought stress in Sorghum bicolor (L.) Moench. Microbiol Res. 2020;232:126409. https://doi.org/10.1016/j.micres.2019.126388
  29. 29. Khan N, Bano A, Babar MDA. The stimulatory effects of plant growth promoting rhizobacteria and plant growth regulators on wheat physiology grown in sandy soil. Arch Microbiol. 2019;201(6):769–85. https://doi.org/10.1007/s00203-019-01644-w
  30. 30. Arora S, Jha PN. Drought-tolerant Enterobacter bugandensis WRS7 induces systemic tolerance in Triticum aestivum L. (wheat) under drought conditions. J Plant Growth Regul. 2023;42(12):7715–30. https://doi.org/10.1007/s00344-023-11044-6
  31. 31. Yadav VK, Yadav RC, Choudhary P, Sharma SK, Bhagat N. Mitigation of drought stress in wheat (Triticum aestivum L.) by inoculation of drought-tolerant Bacillus paramycoides DT-85 and Bacillus paranthracis DT-97. J Appl Biol Biotechnol. 2022;10(4):59–69. https://doil.org/10.7324/JABB.2022.10s109
  32. 32. Gowtham HG, Singh B, Murali M, Shilpa N, Prasad M, Aiyaz M, et al. Induction of drought tolerance in tomato upon the application of ACC deaminase producing plant growth-promoting rhizobacterium Bacillus subtilis Rhizo SF 48. Microbiol Res. 2020;234:126422. https://doi.org/10.1016/j.micres.2020.126422
  33. 33. Chandra D, Srivastava R, Gupta VV, Franco CM, Sharma AK. Evaluation of ACC-deaminase-producing rhizobacteria to alleviate water-stress impacts in wheat (Triticum aestivum L.) plants. Can J Microbiol. 2019;65(5):387–403. https://doi.org/10.1139/cjm-2018-0636
  34. 34. Ilyas N, Mumtaz K, Akhtar N, Yasmin H, Sayyed RZ, Khan W, et al. Exopolysaccharides producing bacteria for the amelioration of drought stress in wheat. Sustainability. 2020;12(21):8851. https://doi.org/10.3390/su12218876
  35. 35. Yasmin H, Rashid U, Hassan MN, Nosheen A, Naz R, Ilyas N, et al. Volatile organic compounds produced by Pseudomonas pseudoalcaligenes alleviated drought stress by modulating defense system in maize (Zea mays L.). Physiol Plant. 2021;172(2):896–911. https://doi.org/10.1111/ppl.13304
  36. 36. Mani KM, Ameena M, Johnson JM, Pillai PS, John J, Beena R. Root endophyte Piriformospora indica significantly affects mechanisms involved in mitigating drought stress in rice (Oryza sativa). Indian J Agron. 2023;68(3):324–27. https://doi.org/10.59797/ija.v68i3.2815
  37. 37. Jyothymol CP, Kutty MS, Pradeepkumar T, Parvathy MS, Rashmi CR. Piriformospora indica improves water stress tolerance in watermelon (Citrullus lanatus (Thunb.) Matsum & Nakai). Plant Physiol Rep. 2024;29(3):638–50. https://doi.org/10.1007/s40502-024-00797-1
  38. 38. Miranda V, Silva-Castro GA, Ruiz-Lozano JM, Fracchia S, García- Romera I. Fungal endophytes enhance wheat and tomato drought tolerance in terms of plant growth and biochemical parameters. J Fungi. 2023;9(3):384. https://doi.org/10.3390/jof9030384
  39. 39. Aruna S. Management of water stress in tomato (Solanum lycopersicum L.) through beneficial root endophytic fungus, Piriformospora indica. PhD [dissertation]. Thrissur (Kerala): Kerala Agricultural University; 2023. http://hdl.handle.net/10603/615716
  40. 40. Liu Y, Wei X. Dark septate endophyte improves the drought-stress resistance of Ormosia hosiei seedlings by altering leaf morphology and photosynthetic characteristics. Plant Ecol. 2021;222(7):761–71. https://doi.org/10.1007/s11258-021-01135-3
  41. 41. Begum N, Ahanger MA, Su Y, Lei Y, Mustafa NSA, Ahmad P, et al. Improved drought tolerance by AMF inoculation in maize (Zea mays) involves physiological and biochemical implications. Plants. 2019;8(12):579. https://doi.org/10.3390/plants8120579
  42. 42. Tallapragada P, Dikshit R, Seshagiri S. Influence of Rhizophagus spp. and Burkholderia seminalis on the growth of tomato (Lycopersicon esculatum) and bell pepper (Capsicum annuum) under drought stress. Commun Soil Sci Plant Anal. 2016;47(17):1975–984. https://doi.org/10.1080/00103624.2016.1216561
  43. 43. Bayani R, Saateyi A, Faghani E. Influence of arbuscular mycorrhiza in phosphorus acquisition efficiency and drought-tolerance mechanisms in barley (Hordeum vulgare L.). Int J Biosci. 2015;7:86–94.
  44. 44. Omirou M, Ioannides IM, Ehaliotis C. Mycorrhizal inoculation affects arbuscular mycorrhizal diversity in watermelon roots, but leads to improved colonization and plant response under water stress only. Appl Soil Ecol. 2013;63:112–19. https://doi.org/10.1016/j.apsoil.2012.09.013
  45. 45. Willis A, Rodrigues BF, Harris PJC. The ecology of arbuscular mycorrhizal fungi. Crit Rev Plant Sci. 2013;32(1):1–20. https://doi.org/10.1080/07352689.2012.683375
  46. 46. Rillig MC, Mummey DL. Mycorrhizas and soil structure. New Phytol. 2006;171(1):41–53. https://doi.org/10.1111/j.1469-8137.2006.01750.x
  47. 47. Javaid A. Arbuscular mycorrhizal mediated nutrition in plants. J Plant Nutr. 2009;32(10):1595–618. https://doi.org/10.1080/01904160903150875
  48. 48. Puthiyottil P, Akkara Y. Pretreatment with Bacillus subtilis mitigates drought induced photo-oxidative damages in okra by modulating antioxidant system and photochemical activity. Physiol Mol Biol Plants. 2021;27(5):945–57. https://doi.org/10.1007/s12298-021-00982-8
  49. 49. Anjum SA, Xie XY, Wang LC, Saleem MF, Man C, Lei W, et al. Morphological, physiological and biochemical responses of plants to drought stress. Afr J Agric Res. 2011;6(9):2026–32. https://doi.org/10.5897/AJAR10.027
  50. 50. Kaur G, Asthir B. Molecular responses to drought stress in plants. Biol Plant. 2017;61(2):201–209. https://doi.org/10.1007/s10535-016-0700-9
  51. 51. Ozturk M, Unal BT, Garcia-Caparros P, Khursheed A, Gul A, Hasanuzzaman M, et al. Osmoregulation and its actions during the drought stress in plants. Physiol Plant. 2021;172:1321–35. https://doi.org/10.1111/ppl.13297
  52. 52. Mani KM, Ameena M, Anith KN, Gopinath PP, Adarsh S, Shanavas S. Altered physiological response in drought stressed rice plants upon root colonization with the beneficial endophytic fungus Piriformospora indica under field conditions. Plant Sci Today. 2024;11(3):576–82. https://doi.org/10.14719/pst.4140
  53. 53. Ngumbi E, Kloepper J. Bacterial-mediated drought tolerance: Current and future prospects. Appl Soil Ecol. 2016;105:109–25. https://doi.org/10.1016/j.apsoil.2016.04.009
  54. 54. Ledermann R, Emmenegger B, Couzigou JM, Zamboni N, Kiefer P, Vorholt JA, et al. Bradyrhizobium diazoefficiens requires chemical chaperones to cope with osmotic stress during soybean infection. mBio. 2021;12(2):1110. https://doi.org/10.1128/mbio.00390-21
  55. 55. Riyas NK. Screening of pink pigmented facultative methylotroph isolates for water stress tolerance and yield in paddy. Thrissur: Kerala Agriculture University; 2019. http://hdl.handle.net/123456789/7693
  56. 56. Laxa M, Liebthal M, Telman W, Chibani K, Dietz KJ. The role of the plant antioxidant system in drought tolerance. Antioxidants. 2019;8(4):94. https://doi.org/10.3390/antiox8040094
  57. 57. Zhang Y, Luan Q, Jiang J, Li Y. Prediction and utilization of malondialdehyde in exotic pine under drought stress using near infrared spectroscopy. Front Plant Sci. 2021;12:682212. https://doi.org/10.3389/fpls.2021.735275
  58. 58. Singh M, Sharma JG, Giri B. Microbial inoculants alter resilience towards drought stress in wheat plants. Plant Growth Regul. 2023;101(3):823–43. https://doi.org/10.1007/s10725-023-01059-0
  59. 59. Gusain YS, Singh US, Sharma AK. Bacterial mediated amelioration of drought stress in drought tolerant and susceptible cultivars of rice (Oryza sativa L.). Afr J Biotechnol. 2015;14(9):764–73. https://doi.org/10.5897/AJB2015.14405
  60. 60. Jogawat A, Yadav B, Lakra N, Singh AK, Narayan OP. Crosstalk between phytohormones and secondary metabolites in the drought stress tolerance of crop plants: A review. Physiol Plant. 2021;172(2):1106–132. https://doi.org/10.1111/ppl.13328
  61. 61. Etesami H, Beattie GA. Plant-microbe interactions in adaptation of agricultural crops to abiotic stress conditions. In: Kumar V, Kumar M, Sharma S, Prasad R, editors. Probiotics and plant health. Singapore: Springer; 2017. p. 163–200. https://doi.org/10.1007/978-981-10-3473-2_7
  62. 62. Vacheron J, Desbrosses G, Bouffaud ML, Touraine B, Moënne-Loccoz Y, Muller D. Plant growth-promoting rhizobacteria and root system functioning. Front Plant Sci. 2013;4:1–19. https://doi.org/10.3389/fpls.2013.00356
  63. 63. Bright J, Desikan R, Hancock JT, Weir IS, Neill SJ. ABA-induced NO generation and stomatal closure in Arabidopsis are dependent on H₂O₂ synthesis. Plant J. 2006;45(1):113–22. https://doi.org/10.1111/j.1365-313X.2005.02615.x
  64. 64. Gontia-Mishra I, Sasidharan S, Tiwari S. Recent developments in use of 1-aminocyclopropane-1-carboxylate (ACC) deaminase for conferring tolerance to biotic and abiotic stress. Biotechnol Lett. 2014;36(5):889–98. https://doi.org/10.1007/s10529-014-1458-9
  65. 65. Glick BR. Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiol Res. 2014;169(1):30–39. https://doi.org/10.1016/j.micres.2013.09.009
  66. 66. Wang KLC, Li H, Ecker JR. Ethylene biosynthesis and signaling networks. Plant Cell. 2002;14:131–51. https://doi.org/10.1105/tpc.001768
  67. 67. Tsavkelova EA, Klimova SY, Cherdyntseva TA, Netrusov AI. Microbial producers of plant growth stimulators and their practical use: A review. Appl Biochem Microbiol. 2006;42(2):117–26. https://doi.org/10.1134/S0003683806020013
  68. 68. Jochum MD, McWilliams KL, Borrego EJ, Kolomiets MV, Niu G, Pierson EA. Bioprospecting plant growth-promoting rhizobacteria that mitigate drought stress in grasses. Front Microbiol. 2019;10:2106. https://doi.org/10.3389/fmicb.2019.02106
  69. 69. Naveed M, Hussain MB, Zahir ZA, Mitter B, Sessitsch A. Drought stress amelioration in wheat through inoculation with Burkholderia phytofirmans strain PsJN. Plant Growth Regul. 2014;73(2):121–31. https://doi.org/10.1007/s10725-013-9874-8
  70. 70. Bhagat N, Raghav M, Dubey S, Bedi N. Bacterial exopolysaccharides: Insight into their role in plant abiotic stress tolerance. J Microbiol Biotechnol. 2021;31(8):1045–1059.
  71. 71. Bomfeti CA, Florentino LA, Guimaraes AP, Cardoso PG, Guerreiro MC, Moreira FMDS. Exopolysaccharides produced by the symbiotic nitrogen-fixing bacteria of Leguminosae. Rev Bras Cienc Solo. 2011;35:657–71. https://doi.org/10.1590/S0100-06832011000300001
  72. 72. Fincheira P, Quiroz A. Microbial volatiles as plant growth inducers. Microbiol Res. 2018;208:63–75. https://doi.org/10.1016/j.micres.2018.01.002
  73. 73. Brilli F, Loreto F, Baccelli I. Exploiting plant volatile organic compounds (VOCs) in agriculture to improve sustainable defense strategies and productivity of crops. Front Plant Sci. 2019;10:264. https://doi.org/10.3389/fpls.2019.00264
  74. 74. Tyagi J, Mishra A, Kumari S, Singh S, Agarwal H, Pudake RN, et al. Deploying a microbial consortium of Serendipita indica, Rhizophagus intraradices and Azotobacter chroococcum to boost drought tolerance in maize. Environ Exp Bot. 2023;206:105142. https://doi.org/10.1016/j.envexpbot.2022.105142
  75. 75. Mani KM, Ameena M, Johnson JM, Anith KN, Pillai PS, John J, et al. Endophytic fungus Piriformospora indica mitigates moisture stress in rice by modifying root growth. Rhizosphere. 2023;28:100799. https://doi.org/10.1016/j.rhisph.2023.100799
  76. 76. Anith KN, Aswini S, Radhakrishnan NV, Nair DS. Root colonization by the endophytic fungus Piriformospora indica improves growth, yield and piperine content in black pepper (Piper nigrum L.). Biocatal Agric Biotechnol. 2018;14:215–20. https://doi.org/10.1016/j.bcab.2018.03.012
  77. 77. Bauer S, John M, McNamara, Barta Z. Environmental variability, reliability of information and the timing of migration. Proc R Soc B Biol Sci. 2020:287:20200622. https://doi.org/10.1098/rspb.2020.0622
  78. 78. Kumar RE, Tiihonen A, Sun S, Fenning DP, Liu Z, Buonassisi T. Opportunities for machine learning to accelerate halide-perovskite commercialization and scale-up. Matter. 2022;5:1353–66. https://doi.org/10.1016/j.matt.2022.04.016
  79. 79. Akbar S, Coiera E, Magrabi, F. Safety concerns with consumer-facing mobile health applications and their consequences: A scoping review. J Am Med Inform Assoc. 2020;27:330–40. https://doi.org/10.1093/jamia/ocz175
  80. 80. Singh D, Thapa S, Yadav J, Singh D, Chakdar H, Umar M, et al. Deciphering the mechanisms of microbe mediated drought stress alleviation in wheat. Acta Physiol Plant. 2023;45:81. https://doi.org/10.1007/s11738-023-03562-3

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