Forthcoming

Endophytic fungal diversity in Terminalia arjuna (Roxb.) Wight & Arn. of Tripura, Northeast India at different sampling sites and plant organs

Authors

DOI:

https://doi.org/10.14719/pst.3045

Keywords:

Endophyte, Ethnobotany, Terminalia arjuna, Fungal diversity

Abstract

Endophytic fungi are ubiquitous in plant kingdom and play a vital role in balancing the microenvironments within the host plants. Fungal endophytes isolated from ethno-botanically important plants were the source of several secondary metabolites with potential biological activities. The present study has documented the variability of culturable endophytic fungi from Terminalia arjuna (Roxb.) Wight & Arn. (Combretaceae), a widely used medicinal plant of Tripura, North-east, India. A total of 613 fungal strains were isolated from 720 tissue segments viz. leaves, bark and root of T. arjuna. The highest numbers of endophytic fungal isolates were found to be colonizing in leaves (257) followed by barks (182) and the least number of isolates were obtained from roots (174). The fungal isolates were classified into 27 individual fungal strains based on morphological and microscopic features. A total of 9 endophytic fungal strains were identified using the nuclear ribosomal DNA internal transcribe sequence and were subjected to phylogeny analysis. Most of the identified morphotypes belonged to phylum Ascomycota. Among all the isolates, Diaporthe sp., Fusarium sp., Colletotrichum sp., Penicillium sp. were the most abundant fungal isolates from T. arjuna. The fungal orders namely Sordariomycetes was the most prevalent followed by Eurotiomycetes and Dothideomycetes. Colonization rate, isolation rate, colonization frequency and relative frequency results suggest that leaf segments harbors maximum endophytic fungi assemblage compared to bark and root tissues. The analysis of Shannon (H'), Simpson (1-D), Fisher alpha (a) and Brillouin (HB) indices had significant difference with locations and tissue type. The host plant harbor unique endophytic community composition in studied sampling locations and their colonization varied between the inoculated vegetative parts of the plant. As no such study has been undertaken in the North- eastern part of India, this pioneer study may enable to unearth novel fungal endophytes that might have beneficial role in plant growth promotion, stress tolerance etc.

Downloads

Download data is not yet available.

References

Petrini O. Fungal endophytes of tree leaves. In Microbial Ecology of Leaves (ed. j. H. Andrews & S. S. Hirano), Springer Verlag: New York. 1991;pp. 179-97. https://doi.org/10.1007/978-1-4612-3168-4_9

Sadeghi F, Samsampour D, Seyahooei MA, Bagheri A, Soltani J. Diversity and spatiotemporal distribution of fungal endophytes associated with Citrus reticulata cv. Siyahoo. Curr Microbiol. 2019 Mar;76(3):279-89. doi:10.1007/s00284-019-01632-9

Krings M, Taylor TN, Hass H, Kerp H, Dotzler N, Hermsen EJ. Fungal endophytes in a 400-million-yr-old land plant: Infection pathways, spatial distribution and host responses. New Phytol. 2007;174(3):648-57. http://dx.doi.org/10.1111/j.1469-8137.2007.02008.x

Guevara-Araya MJ, Vilo C, Urzúa A. Differences in community composition of endophytic fungi between above and below ground tissues of Aristolochia chilensis in an arid ecosystem. Rev Chil de Hist Nat. 2020;93:3. https://doi.org/10.1186/s40693-020-00091-y

Malinowski DP, Belesky DP. Ecological importance of Neotyphodium spp. grass endophytes in agroecosystems. Grassland Science. 2006;52:1-14. https://doi.org/10.1111/j.1744-697X.2006.00041.x

Rather RA, Srinivasan V, Anwar M. Seasonal deviation effects foliar endophyte assemblage and diversity in Asparagus racemosus and Hemidesmus indicus. BMC Ecol. 2018;18:52. https://doi.org/10.1186/s12898-018-0211-y

Soltani J. Endophytism in Cupressoideae (Coniferae): A model in endophyte biology and biotechnology. In: Maheshwari, D. (eds) Endophytes: Biology and Biotechnology. Sustainable Development and Biodiversity. Springer, Cham. 2017;vol 15. https://doi.org/10.1007/978-3-319-66541-2_6

Kumar V, Prasher IB. Seasonal variation and tissues specificity of endophytic fungi of Dillenia indica L. and their extracellular enzymatic activity. Arch Microbiol. 2022;204:341. https://doi.org/10.1007/s00203-022-02933-7

Rodriguez RJ, White JF Jr, Arnold AE, Redman RS. Fungal endophytes: Diversity and functional roles. New Phytol. 2009;182:314-30. https://doi.org/10.1111/j.1469-8137.2009. 02773.x

Ming Q, Su C, Zheng C, Jia M, Zhang Q, Zhang H et al. Elicitors from the endophytic fungus Trichoderma atroviride promote Salvia miltiorrhiza hairy root growth and tanshinone biosynthesis. J Exp Bot. 2013;64:5687-94. https:// doi.org/ 10. 1093/ jxb/ ert342

Panaccione DG, Beaulieu WT, Cook D. Bioactive alkaloids in vertically transmitted fungal endophytes. Funct Ecol. 2014;28:299-314. https:// doi.org/ 10. 1111/ 1365- 2435

Griffin EA, Traw MB, Morin PJ, Pruitt JN, Wright SJ, Carson WP. Foliar bacteria and soil fertility mediate seedling performance: A new and cryptic dimension of niche differentiation. Ecology. 2016 Nov;97(11):2998-3008. doi:10.1002/ecy.1537

Liu H, Carvalhais LC, Crawford M, Singh E, Dennis PG, Pieterse CMJ, Schenk PM. Inner plant values: Diversity, colonization and benefits from endophytic bacteria. Front Microbiol. 2017 Dec 19;8:2552. doi:10.3389/fmicb.2017.02552

Hirakue A, Sugiyama S. Relationship between foliar endophytes and apple cultivar disease resistance in an organic orchard. Biological Control. 2018;Vol. 127:139-44. https://doi.org/10.1016/j.biocontrol.2018.09.007

Yan L, Zhu J, Zhao X, Shi J, Jiang C, Shao D. Beneficial effects of endophytic fungi colonization on plants. Appl Microbiol Biotechnol. 2019 Apr;103(8):3327-40. doi: 10.1007/s00253-019-09713-2

Gupta S, Chaturvedi P, Kulkarni MG, Van Staden J. A critical review on exploiting the pharmaceutical potential of plant endophytic fungi. Biotechnol Adv. 2020 Mar-Apr;39:107462. doi:10.1016/j.biotechadv.2019.107462

Petrini O, Sieber TN, Toti L, Viret O. Ecology, metabolite production and substrate utilization in endophytic fungi. Nat Toxins. 1992;1(3):185-96. doi:10.1002/nt.2620010306

Coleman-Derr D, Desgarennes D, Fonseca-Garcia C, Gross S, Clingenpeel S, Woyke T et al. Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species. New Phytol. 2016 Jan;209(2):798-811. doi:10.1111/nph.13697

Maggini V, Mengoni A, Gallo ER, Biffi S, Fani R, Firenzuoli F, Bogani P. Tissue specificity and differential effects on in vitro plant growth of single bacterial endophytes isolated from the roots, leaves and rhizospheric soil of Echinacea purpurea. BMC Plant Biol. 2019 Jun 28;19(1):284. doi:10.1186/s12870-019-1890-z

Marag PS, Suman A. Growth stage and tissue specific colonization of endophytic bacteria having plant growth promoting traits in hybrid and composite maize (Zea mays L.). Microbiol Res. 2018 Sep;214:101-13. doi:10.1016/j.micres.2018.05.016

Li JL, Sun X, Chen L, Guo LD. Community structure of endophytic fungi of four mangrove species in Southern China. Mycology. 2016;7:180-90. https://doi.org/10.1080/21 501203.2016.1258439

Collado J, Platas G, González I, Peláez F. Geographical and seasonal influences on the distribution of fungal endophytes in Quercus ilex. New Phytol. 1999 Dec;144(3):525-32. doi:10.1046/j.1469-8137.1999.00533.x

Göre ME, Bucak C. Geographical and seasonal influences on the distribution of fungal endophytes in Laurus nobilis. Forest Pathology. Aug 2007;37(4):281-88. https://doi.org/10.1111/j.1439-0329.2007.00509.x

Naik BS, Shashikala J, Krishnamurthy YL. Study on the diversity of endophytic communities from rice (Oryza sativa L.) and their antagonistic activities in vitro. Microbiol Res. 2009;164(3):290-96. https://doi.org/10.1016/j.micres.2006.12.003

Singh DK, Sharma VK, Kumar J. Diversity of endophytic mycobiota of tropical tree Tectona grandis Linn.f.: Spatiotemporal and tissue type effects. Sci Rep. 2017;7:3745 https://doi.org/10.1038/s41598-017-03933-0

Stace CA. Combretaceae. In: Kubitzki, K. (eds) flowering plants· Eudicots. The Families and Genera of Vascular Plants. Springer, Berlin, Heidelberg. 2007;9:67-82. https://doi.org/10.1007/978-3-540-32219-1_11

Li K, Diao Y, Zhang H, Wang S, Zhang Z, Yu B et al. Tannin extracts from immature fruits of Terminalia chebula Fructus Retz. promote cutaneous wound healing in rats. BMC Complement Altern Med. 2011 Oct 7;11:86. doi:10.1186/1472-6882-11-86

Tejesvi MV, Kini KR, Prakash HS, Subbiah V, Shetty HS. Genetic diversity and antifungal activity of species of Pestalotiopsis isolated as endophytes from medicinal plants. Fungal Divers. 2007 Jan 31;24(3):1-8.

Felber AC, Orlandelli RC, Rhoden SA, Garcia A, Costa AT, Azevedo JL, Pamphile JA. Bioprospecting foliar endophytic fungi of Vitis labrusca Linn., Bordô and Concord cv. Annals of Microbiology. 2016 Jun;66(2):765-75. https://doi.org/10.1007/s13213-015-1162-6

KouipouToghueo RM, Boyom FF. Endophytic fungi from Terminalia species: A comprehensive review. J Fungi (Basel). 2019 May 24;5(2):43. doi:10.3390/jof5020043

Jena SK, Tayung K. Endophytic fungal communities associated with two ethno-medicinal plants of Similipal Biosphere Reserve, India and their antimicrobial prospective. J App Pharm Sci. 2013;3(4 Suppl 1):S7-S12.

Bhattacharya S, Debnath S, Saha AK. Diversity of foliar endophytic fungi in Artocarpus heterophyllus Lam. and Citrus reticulata Blanco of Tripura. Journal of Tropical Life Science. 2021;11(2):251-58. doi:10.11594/jtls.11.02.15

Sambrook J, Fritsch EF, Maniatis T. Molecular cloning a laboratory manual. New York: Cold Spring Harbor Laboratory Press;1989.

Boratyn GM, Camacho C, Cooper PS, Coulouris G, Fong A, Ma N et al. BLAST: A more efficient report with usability improvements. Nucleic Acids Res. 2013;41:W29-W33. https://doi.org/10.1093/nar/gkt282

Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol. 1990;215:403-10. https:// doi.org/ 10. 1016/ S0022- 2836(05) 80360-2

Tamura K, Stecher G, Kumar S. MEGA 11: Molecular evolutionary genetics analysis version 11. Molecular Biology and Evolution. 2021. https://doi.org/10.1093/molbev/msab120

Maheswari S, Rajagopal K. Biodiversity of endophytic fungi in Kigelia pinnata during two different seasons. Curr Sci. 2013;104:515-18.

Sunayana N, Nalini MS, Sampath KKK, Prakash HS. Diversity studies on the endophytic fungi of Vitex negundo L. Mycosphere. 2014;5(4):578-90. https:// doi.org/10.5943/mycosphere/5/ 4/ 10

Suryanarayanan TS, Venkatesan G, Murali TS. Endophytic fungal communities in leaves of tropical forest trees: Diversity and distribution patterns. Current Science. 2003;85(4):489-93. http://www.jstor.org/stable/24108544

Huang WY, Cai YZ, Hyde KD, Corke H, Sun M. Biodiversity of endophytic fungi associated with 29 traditional Chinese medicinal plants. Fungal Diversity. 2008;33:61-75.

R Core Team 2022. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.

https://www.R-project.org/.

Al-Harthi HF, Elgorgan AM, Ahmed B, Bahkali AH, ElSheshtawi M, Shaik JP et al. Identification, molecular characterization and plant growth promoting activities of endophytic fungi of Jasminum sambac, Camellia sinensis and Ocimum basilicum. Journal of King Saud University – Science. 2023;Volume 35(3):102558.

https://doi.org/10.1016/j.jksus.2023.102558

Ming Q, Huang X, Guo L, Liu D, Qin L, He Y et al. Diversity of endophytic fungi in Coptis chinensis Franch. and their activity against methicillin-resistant Staphylococcus aureus. Folia Microbiol (Praha). 2022 Dec;67(6):965-74. doi:10.1007/s12223-022-00994-1

Kharwar RN, Gond SK, Kumar A, Mishra A. A comparative study of endophytic and epiphytic fungal association with leaf of Eucalyptus citriodora Hook. and their antimicrobial activity. World Journal of Microbiology and Biotechnology. 2010 Nov;26:1941-48. https://doi.org/10.1007/s11274-010-0374-y

Esposito E, Azevedo JL. Fungos: umaintroduc¸ ão à biologia, bioquímica e biotecnologia. 2nd ed Caxias do Sul: Edusc; 2004.

Saikkonen K, Saari SS, Helander M. Defensive mutualism between plants and endophytic fungi? Fungal Diversity. 2010;41:101-13. http://dx.doi.org/10.1007/s13225-010-0023-7

Du W, Yao Z, Li J, Sun C, Xia J, Wang B. Diversity and antimicrobial activity of endophytic fungi isolated from Securinega suffruticosa in the Yellow River Delta. PLoS ONE. 2020;15(3):e0229589. https://doi.org/10.1371/journal.pone.0229589

Suryanarayanan TS, Devarajan PT, Girivasan KP, Govindarajulu MB, Kumaresan V, Murali TS et al. The host range of multi-host endophytic fungi. Current Science. 2018 Nov 25;115(10):1963-69. https://doi.org/10.18520/cs/v115/i10/1963-1969

Tejesvi MV, Mahesh B, Nalini MS, Prakash HS, Kini KR, Subbiah V, Shetty HS. Fungal endophyte assemblages from ethnopharmaceutically important medicinal trees. Can J Microbiol. 2006 May;52(5):427-35. doi:10.1139/w05-143

Wu L, Han T, Li W, Jia M, Xue L, Rahman K, Qin L. Geographic and tissue influences on endophytic fungal communities of Taxus chinensis var. mairei in China. Current Microbiology. 2013 Jan;66:40-48. https://doi.org/10.1007/s00284-012-0235-z

Jahromi MS, Azizi A, Soltani J. Diversity and spatiotemporal distribution of fungal endophytes associated with Salvia multicaulis. Current Microbiology. 2021 Apr;78:1432-47. https://doi.org/10.1007/s00284-021-02430-y

Published

13-06-2024

How to Cite

1.
Tripura S, Debbarma P, Paul S, Saha R, Ajay Krishna Saha. Endophytic fungal diversity in Terminalia arjuna (Roxb.) Wight & Arn. of Tripura, Northeast India at different sampling sites and plant organs. Plant Sci. Today [Internet]. 2024 Jun. 13 [cited 2024 Jun. 18];. Available from: https://horizonepublishing.com/journals/index.php/PST/article/view/3045

Issue

Section

Research Articles