Plant probiotic microbes – trending microbes for plant growth and value addition of compost- a review

Authors

  • Aakash Ravi Department of Soil Science and Agricultural Chemistry, V. O. Chidambaranar Agricultural College and Research Institute, Killikulam, Tamil Nadu, India https://orcid.org/0009-0006-2312-434X
  • Jeberlin Prabina Department of Soil Science and Agricultural Chemistry, V. O. Chidambaranar Agricultural College and Research Institute, Killikulam, Tamil Nadu, India https://orcid.org/0000-0003-0358-8041
  • Gomathy M Department of Soil Science and Agricultural Chemistry, V. O. Chidambaranar Agricultural College and Research Institute, Killikulam, Tamil Nadu, India https://orcid.org/0000-0001-8826-3339
  • Ramesh P.T Department of Soil Science and Agricultural Chemistry, V. O. Chidambaranar Agricultural College and Research Institute, Killikulam, Tamil Nadu, India https://orcid.org/0000-0003-1157-650X
  • Hemalatha M Ph.DDepartment of Agronomy, V. O. Chidambaranar Agricultural College and Research Institute, Killikulam, Tamil Nadu, India https://orcid.org/0000-0001-7318-6780

DOI:

https://doi.org/10.14719/pst.4523

Keywords:

bacteria, yeast, plant probiotic microbes, growth promoting hormones, compost

Abstract

New agricultural approaches, including natural and organic farming, have developed organic and microbiological goods. Beneficial microbes known as plant probiotic microorganisms (PPM) are primarily found in soil and have coevolved with plants in a symbiotic or free-living relationship. By encouraging plant growth and health, these bacteria lessen the need for artificial fertilizers, support environmentally friendly agricultural practices, and improve plant health. Agroecosystem vigour, biodiversity, biological cycles, and soil biological activity are all enhanced by using plant probiotic bacteria in biologically based agriculture. By using beneficial bacteria to support the health and function of the host organism, plant probiotics aim to lessen the demand for toxic pesticides and fertilizers. Using these probiotic microorganisms will have a synergistic and advantageous effect on crop production. Plant probiotic microorganisms improve the overall quality of compost throughout the composting process by accelerating the breakdown of organic materials and introducing helpful bacteria. This rich compost adds beneficial bacteria to the soil, creating a healthy and productive environment. This review looks at the common plant probiotic bacteria, how they work, how they complement each other to improve compost quality and plant growth, how they might be used in agriculture, and how they could change how composting is done.

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References

Astafyeva Y, Gurschke M, Qi M, Bergmann L, Indenbirken D, de Grahl I, Katzowitsch E, Reumann S, Hanelt D, Alawi M, Streit WR. Microalgae and bacteria interaction—evidence for division of diligence in the alga microbiota. Microbiology Spectrum. 2022;10(4):e00633-22. https://doi.org/10.1128/spectrum.00633-22

Bharti N, Sharma SK, Saini S, Verma A, Nimonkar Y, Prakash O. Microbial plant probiotics: problems in application and formulation. In: Kumar V, Kumar M, Sharma S, Prasad R, Eds. Probiotics and plant health, Springer, Singapore. 2017: 317-335. https://doi.org/10.1007/978-981-10-3473-2_13

Kaur M, Bhat RA. Modulated Vermibiotechnology for the Management of Solid Waste. InZero Waste Management Technologies 2024 Jun 30 (pp. 185-212). Cham: Springer Nature Switzerland. https://doi.org/10.1007/978-3-031-57275-3_9

Waqas M, Hashim S, Humphries UW, Ahmad S, Noor R, Shoaib M, Naseem A, Hlaing PT, Lin HA. Composting processes for agricultural waste management: a comprehensive review. Processes. 2023;11(3):731. https://doi.org/10.3390/pr11030731

Ignatova LV, Brazhnikova YV, Berzhanova RZ, Mukasheva TD. Plant growth-promoting and antifungal activity of yeasts from dark chestnut soil. Microbiol Res. 2015; 175: 78–183. https://doi.org/10.1016/j.micres.2015.03.008

Zhu A, Tan H, Cao L. Isolation of phytase-producing yeasts from rice seedlings for prospective probiotic applications. 2019; 3 Biotech 9: 216. https://doi.org/10.1007/s13205-019-1746-0

Nutaratat P, Srisuk N, Arunrattiyakorn P, Limtong S. Plant growth-promoting traits of epiphytic and endophytic yeasts isolated from rice and sugar cane leaves in Thailand. Fungal Biol. 2014; 118(8): 683–694. https://doi.org/10.1016/j.funbio.2014.04.010

Xin G, Glawe D, Doty S L. Characterization of three endophytic, indole-3-acetic acid-producing yeasts occurring in Populus trees. Mycol Res. 2009; 113(9): 973-980. https://doi.org/10.1016/j.mycres.2009.06.001

Imran A, Mirza MS, Shah TM, Malik KA, Hafeez FY. Differential response of kabuli and desi chickpea genotypes toward inoculation with PGPR in different soils. Frontiers in microbiology. 2015;6:859. https://doi.org/10.3389/fmicb.2015.00859

Kumar H, Dubey RC, Maheshwari DK. Seed-coating fenugreek with Burkholderia rhizobacteria enhances yield in field trials and can combat Fusarium wilt. Rhizosphere. 2017;3:92-9. https://doi.org/10.1016/j.rhisph.2017.01.004

Singh N, Singh G, Aggarwal N, Khanna V. Yield enhancement and phosphorus economy in lentil (Lens culinaris Medikus) with integrated use of phosphorus, Rhizobium and plant growth promoting rhizobacteria. Journal of Plant Nutrition. 2018;41(6):737-48. https://doi.org/10.1080/01904167.2018.1425437

Islam T, Fatema, Hoque MN, Gupta DR, Mahmud NU, Sakif TI, Sharpe AG. Improvement of growth, yield and associated bacteriome of rice by the application of probiotic Paraburkholderia and Delftia. Frontiers in Microbiology. 2023;14:1212505. https://doi.org/10.3389/fmicb.2023.1212505

Chaudhary P, Khati P, Chaudhary A, Maithani D, Kumar G, Sharma A. Cultivable and metagenomic approach to study the combined impact of nanogypsum and Pseudomonas taiwanensis on maize plant health and its rhizospheric microbiome. PLoS One. 2021;16(4):e0250574. https://doi.org/10.1371/journal.pone.0250574

Zhang C, Yu Z, Zhang M, Li X, Wang M, Li L, Li X, Ding Z, Tian H. Serratia marcescens PLR enhances lateral root formation through supplying PLR-derived auxin and enhancing auxin biosynthesis in Arabidopsis. Journal of Experimental Botany. 2022;73(11):3711-25. https://doi.org/10.1093/jxb/erac074

Guo Q, Sun Y, Shi M, Han X, Jing Y, Li Y, Li H, Lai H. Pseudomonas koreensis promotes tomato growth and shows potential to induce stress tolerance via auxin and polyphenol?related pathways. Plant and Soil. 2021;462:141-58. https://doi.org/10.1007/s11104-021-04837-9

Kumar P, Sharma N, Sharma S, Gupta R. Rhizosphere stochiometry, fruit yield, quality attributes and growth response to PGPR transplant amendments in strawberry (Fragaria× ananassa Duch.) growing on solarized soils. Scientia Horticulturae. 2020;265:109215. https://doi.org/10.1016/j.scienta.2020.109215

Joubert PM, Doty SL. Endophytic Yeasts: Biology, Ecology and Applications. In: Pirttilä A, Frank A, Eds. Endophytes of Forest Trees. Forestry Sciences. Springer, Cham. 2018; 86: 3-14. https://doi.org/10.1007/978-3-319-89833-9_1

Heydarian Z, Gruber M, Coutu C, Glick BR, Hegedus DD. Gene expression patterns in shoots of Camelina sativa with enhanced salinity tolerance provided by plant growth-promoting bacteria producing 1-aminocyclopropane-1-carboxylate deaminase or expression of the corresponding acdS gene. Scientific Reports. 2021;11(1):4260. https://doi.org/10.1038/s41598-021-83629-8

Fernández-Llamosas H, Ibero J, Thijs S, Imperato V, Vangronsveld J, Díaz E, Carmona M. Enhancing the rice seedlings growth promotion abilities of Azoarcus sp. CIB by heterologous expression of ACC deaminase to improve performance of plants exposed to cadmium stress. Microorganisms. 2020;8(9):1453.

Shruthi B, Deepa N, Somashekaraiah R, Adithi G, Divyashree S, Sreenivasa MY. Exploring biotechnological and functional characteristics of probiotic yeasts: A review. Biotechnology Reports. 2022;34:e00716. https://doi.org/10.1016/j.btre.2022.e00716

Amprayn KO, Rose MT, Kecskes M, Pereg L, Nguyen HT, Kennedy IR. Plant growth promoting characteristics of soil yeast (Candida tropicalis HY) and its effectiveness for promoting rice growth. Appl Soil Ecol. 2012; 61:295-299. https://doi.org/10.1016/j.apsoil.2011.11.009

Agamy R, Hashem M, Alamri S. Effect of soil amendment with yeasts as bio-fertilizers on the growth and productivity of sugar beet. African Journal of Agricultural Research. 2013 Jan 8;8(1):46-56. https://doi.org/10.5897/AJAR12.1989

Jayakumar A, Padmakumar P, Nair IC, Radhakrishnan EK. Drought-tolerant bacterial endophytes with potential plant probiotic effects from Ananas comosus. Biologia. 2020 Oct;75(10):1769-78. https://doi.org/10.2478/s11756-020-00483-1

Amprayn KO, Rose MT, Kecskes M, Pereg L, Nguyen HT, Kennedy IR. Plant growth promoting characteristics of soil yeast (Candida tropicalis HY) and its effectiveness for promoting rice growth. Appl Soil Ecol. 2012; 61:295-299. https://doi.org/10.1016/j.apsoil.2011.11.009

Freimoser FM, Rueda-Mejia MP, Tilocca B, Migheli Q. Biocontrol yeasts: mechanisms and applications. World J Microbiol Biotechnol. 2019; 35: 154. https://doi.org/10.1007/s11274-019-2728-4

Shalaby MES, El-Nady MF. Application of Saccharomyces cerevisiae as a biocontrol agent against Fusarium infection of sugar beet plants. Acta Biologica Szegediensis, 2008; 52(2): 271-275

Sun PF, Chien IA, Xiao HS, Fang WT, Hsu CH and Chou JY. Intra-specific variation in plant growth-promoting traits of Aureobasidium pullulans. Chiang Mai J Sci. 2019; 46(1): 15-31.

Ferraz P, Cássio F, Lucas C. Potential of yeasts as biocontrol agents of the phytopathogen causing cacao witches' broom disease: is microbial warfare a solution? Front Microbiol 2019; 10:1766. https://doi.org/10.3389/fmicb.2019.01766

Cong Z, Kang S, Smirnov A, Holben B. Aerosol optical properties at Nam Co, a remote site in central Tibetan Plateau. Atmospheric Research. 2009 Mar 1;92(1):42-8. https://doi.org/10.1016/j.atmosres.2008.08.005

Lonhienne T, Mason MG, Ragan MA, Hugenholtz P, Schmidt S, Paungfoo?Lonhienne C. Yeast as a biofertilizer alters plant growth and morphology. Crop Science, 2014; 54(2): 785-790. https://doi.org/10.2135/cropsci2013.07.0488

Prabina BJ, Kumutha K, Anandham R, Durga P. Isolation and characterization of multifunctional yeast as plant probiotics for better crop nutrition in pulses. Int J Curr Microbiol Appl Sci. 2019; 8: 2711-2718. https://doi.org/10.20546/ijcmas.2019.801.286

Nogueira Júnior AF, Tränkner M, Ribeiro RV, Von Tiedemann A, Amorim L. Photosynthetic cost associated with induced defense to Plasmopara viticola in grapevine. Frontiers in Plant Science. 2020;11:235. https://doi.org/10.3389/fpls.2020.00235

Mohammed AS, El Hassan SM, Elballa MM, Elsheikh EA. The role of Trichoderma, VA mycorrhiza and dry yeast in the control of Rhizoctonia disease of potato (Solanum tuberosum L.). U K J Agric. Sci. 2008; 16(2): 285-301

Carro L, Nouioui I. Taxonomy and systematics of plant probiotic bacteria in the genomic era. AIMS microbiology. 2017; 3(3) :383. https://doi.org/10.3934%2Fmicrobiol.2017.3.383

Picard C, Baruffa E, Bosco M. Enrichment and diversity of plant-probiotic microorganisms in the rhizosphere of hybrid maize during four growth cycles. Soil Biol. Biochem. 2008; 40(1): 106-115. https://doi.org/10.1016/j.soilbio.2007.07.011

De Palma MD, Agostino N, Proietti S, Bertini L, Lorito M, Ruocco M, Caruso C, Chiusano ML, Tucci M. Suppression subtractive hybridization analysis provides new insights into the tomato (Solanum lycopersicum L.) response to the plant probiotic microorganism Trichoderma longibrachiatum MK1. J. Plant Physiol. 2016; 190:79-94. https://doi.org/10.1016/j.jplph.2015.11.005

Aguilar-Marcelino L, Al-Ani LK, Castañeda-Ramirez GS, Garcia-Rubio V, Ojeda-Carrasco JJ. Microbial technologies to enhance crop production for future needs. In New and Future Developments in Microbial Biotechnology and Bioengineering 2020 Jan 1 (pp. 29-47). Elsevier. https://doi.org/10.1016/B978-0-12-820526-6.00003-8

Nevita T, Sharma GD, Pandey P. Differences in rice rhizosphere bacterial community structure by application of lignocellulolytic plant-probiotic bacteria with rapid composting traits. Ecological Engineering. 2018;120:209-21. https://doi.org/10.1016/j.ecoleng.2018.06.007

Amrullah S, Amin M, Ali M. Converting husbandry waste into liquid organic fertilizer using probiotic consortiums (Lactobacillus sp., Rhodopseudomonas sp., Actinomycetes sp., Streptomyces sp.). InIOP Conference Series: Earth and Environmental Science 2021;679: 1. IOP Publishing. https://doi.org/10.1088/1755-1315/679/1/012001

Zhang Z, Gu Y, Wang S, Zhen Y, Chen Y, Wang Y, Mao Y, Meng J, Duan Z, Xu J, Wang M. Effective microorganism combinations improve the quality of compost-bedded pack products in heifer barns: exploring pack bacteria-fungi interaction mechanisms. BMC Microbiology. 2024;24(1):302. https://doi.org/10.1186/s12866-024-03447-6

Nevita T, Sharma GD, Pandey P. Composting of rice-residues using lignocellulolytic plant-probiotic Stenotrophomonas maltophilia, and its evaluation for growth enhancement of Oryza sativa L. Environmental Sustainability. 2018;1:185-96.

Wang L, Wang T, Xing Z, Zhang Q, Niu X, Yu Y, Teng Z, Chen J. Enhanced lignocellulose degradation and composts fertility of cattle manure and wheat straw composting by Bacillus inoculation. Journal of Environmental Chemical Engineering. 2023;11(3):109940. https://doi.org/10.1016/j.jece.2023.109940

Haruna A, Yahaya SM. Recent advances in the chemistry of bioactive compounds from plants and soil microbes: A review. Chemistry Africa. 2021;4(2):231-48. https://doi.org/10.1007/s42250-020-00213-9

Sial TA, Rajpar I, Khan MN, Ali A, Shan M, Rajput AB, Shah PA. Impact of Fruit and Vegetable Wastes on the Environment and Possible Management Strategies. InPlanet Earth: Scientific Proposals to Solve Urgent Issues 2024 Mar 14 (pp. 307-330). Cham: Springer International Publishing. https://doi.org/10.1007/978-3-031-53208-5_14

Published

15-09-2024 — Updated on 20-09-2024

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How to Cite

1.
Aakash Ravi, Jeberlin Prabina B, Gomathy M, Ramesh P. T, Hemalatha M. Plant probiotic microbes – trending microbes for plant growth and value addition of compost- a review. Plant Sci. Today [Internet]. 2024 Sep. 20 [cited 2024 Nov. 23];11(3). Available from: https://horizonepublishing.com/journals/index.php/PST/article/view/4523

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