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Research Articles

Vol. 13 No. 3 (2026)

Preliminary genetic detection of Xanthomonas campestris pv. musacearum isolates using PCR markers in southwestern Ethiopia

DOI
https://doi.org/10.14719/pst.12417
Submitted
25 October 2025
Published
08-07-2026 — Updated on 12-08-2026
Versions

Abstract

Among the major enset (Ensete ventricosum (Welw.) Cheesman) diseases in Ethiopia, bacterial wilt caused by Xanthomonas campestris pv. musacearum (Xcm) is a destructive disease that limits the enset production in growing areas. Diversity within the bacterial pathogen population is not well studied in the southwestern part of the country. Therefore, the objective of this research was to evaluate the genetic characteristics of the Xcm pathogens collected from southwestern Ethiopia. From 120 Xcm isolates, 30 were randomly selected after the isolates were clustered into their respective farmer associations based on their cultural and morphological similarities and differences. The bacterial isolates originated from wilted enset plants collected from 30 enset fields in 10 major enset growing districts. Based on its morphology, the collected isolate was known as Xcm and its identity was confirmed by a pathogenicity test, as the pathogen caused wilting and necrosis of leaves like that seen in the field. However, the bacterial isolates were found to be variable in the appearance of colony colour and growth types. Moreover, based on the analysis of molecular characterisation studies, the isolates were likely reflecting genetic diversity as the observed variation in amplification and detection among isolates using a 468bp primer (P2). Hence, there is a need for further investigation to find out and recommend a pathogen strain-specific management system.

References

  1. 1. Alemayehu C, Tadesse K, Bomme G. Natural occurrence and pathogenicity of Xanthomonas bacteria on selected plants. Afr J Biotechnol. 2016;15:2146–55. https://doi.org/10.5897/AJB2016.15502
  2. 2. Haile B, Fininsa C, Terefe H, Hussen S, Chala A. Biochemical characteristics and pathogenicity of Xanthomonas campestris pv. musacearum isolates from southwestern Ethiopia. Pest Manag J Ethiop. 2019;22:89–110.
  3. 3. Befekadu H, Fininsa C, Terefe H, Chala A, Hussen S. Evaluation of enset (Ensete ventricosum) clones for resistance against pathogenic Xanthomonas campestris pv. musacearum isolates from southwestern Ethiopia. Cogent Food Agric. 2020;6:1773094. https://doi.org/10.1080/23311932.2020.1773094
  4. 4. Dereje A. Studies on the bacterial wilt of enset (Ensete ventricosum) and prospects for its control. Ethiop J Agric Sci. 1985;7:1–14.
  5. 5. Befekadu H, Grima A, Fikire H. Physiological characteristics and pathogenicity of Xanthomonas campestris pv. musacearum strains collected from enset and banana in southwest Ethiopia. Afr J Biotechnol. 2014;13:2425–34. https://doi.org/10.5897/AJB2014.13794
  6. 6. Befekadu H, Chemeda F, Habtamu T, Shimelis H, Alemayehu C. Spatial distribution of enset bacterial wilt (Xanthomonas campestris pv. musacearum) and its association with biophysical factors in southwestern Ethiopia. Ethiop J Agric Sci. 2020;30(3):33–55.
  7. 7. Dye DW, Bradbury JF, Goto M, Hayward AC, Lelliott RA, Schroth MN. International standards for naming pathovars of phytopathogenic bacteria: a list of pathovar names and pathotype strains. Rev Plant Pathol. 1980;59:153–68.
  8. 8. Guerrero R. Bergey's manuals and the classification of prokaryotes. Int Microbiol. 2001;4(2):103–9. https://doi.org/10.1007/s10123-001-0033-1
  9. 9. Bradbury JF. Xanthomonas Dowson 1939. In: Bergey’s manual of systematic bacteriology. Vol. 1. Krieg NR, Holt JG, editors. Baltimore: Williams and Wilkins; 1984.
  10. 10. Aritua V, Parkinson N, Thwaites R, Heeney JV, Jones DR, Tushemereirwe W, et al. Characterisation of the Xanthomonas sp. causing wilt of enset and banana and its proposed reclassification as a strain of Xanthomonas vasicola. Plant Pathol. 2008;57:170–7. https://doi.org/10.1111/j.1365-3059.2007.01687.x
  11. 11. Kidist B. Characterisation of Xanthomonas campestris pv. musacearum isolates: causal agent of enset bacterial wilt disease [MSc thesis]. Addis Ababa: Addis Ababa University; 2003.
  12. 12. Gizachew W. Variation in isolates of enset pathogen (Xanthomonas campestris pv. musacearum) and reaction on enset clones (Ensete ventricosum (Welw) Cheesman) to this disease. [MSc thesis]. Alemaya: Alemaya University; 2000.
  13. 13. Fikre H, Gizachew W. Evaluation of enset clone Meziya against enset bacterial wilt. Afr Crop Sci Conf Proc. 2007;8:887–90.
  14. 14. Gabriel DW, De Feyter R. RFLP analyses and gene tagging for bacterial identification and taxonomy. In: Gurr SJ, McPherson MJ, Bowles DJ, editors. Molecular plant pathology: a practical approach. Vol. 1. Oxford: IRL Press; 1992.p.51–66. https://doi.org/10.1093/oso/9780199631032.003.0006
  15. 15. Veracruz CM, Ardales EY, Skinner DZ, Talag J, Nelson RJ, Louws FJ, et al. Measurement of haplotypic variation in Xanthomonas oryzae pv. oryzae within a single field by rep-PCR and RFLP analyses. Phytopathology. 1996;86(12):1352–9.
  16. 16. Quimio JA. Final technical report of the World Bank (IDA)-funded enset pathology project. September 15, 1993 to July 15, 1994. 135 p.
  17. 17. Schaad NW, Stall RE. Xanthomonas. In: Schaad NW, editor. Laboratory guide for identification of plant pathogenic bacteria. 2nd ed. Minnesota: APS Press; 1988.p.81–4.
  18. 18. Adikini S, Tripathi L, Beeda F, Tusiime G, Magembe M, Kim J. Development of a specific molecular tool for detecting Xanthomonas campestris pv. musacearum. Plant Pathol. 2011;60:443–52. https://doi.org/10.1111/j.1365-3059.2010.02419.x
  19. 19. Tsehay M. Studies on genetic and phenotypic variation between enset and banana isolates of bacterial wilt pathogen (Xanthomonas campestris pv. musacearum) in Ethiopia. [MSc thesis]. Ambo: Ambo University; 2009.
  20. 20. Tripathi L, Odipio J, Tripathi J, Tusiime G. A rapid technique for screening banana cultivars for resistance to Xanthomonas wilt. Eur J Plant Pathol. 2008;121:9–19. https://doi.org/10.1007/s10658-007-9235-4
  21. 21. Odipio J, Tusiime G, Tripathi L, Aritua V. Genetic homogeneity among Ugandan isolates of Xanthomonas campestris pv. musacearum revealed by randomly amplified polymorphic DNA analysis. Afr J Biotechnol. 2009;8(21):5652–60. https://doi.org/10.5897/AJB09.1063

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