Skip to main navigation menu Skip to main content Skip to site footer

Research Articles

Vol. 13 No. sp2 (2026): Recent Advances in Agriculture

Assessment and genetic characterisation of stripe rust resistance at seedling and adult plant stages in bread wheat germplasm

DOI
https://doi.org/10.14719/pst.13806
Submitted
25 January 2026
Published
15-06-2026

Abstract

Stripe rust or yellow rust caused by Puccinia striiformis f. sp. tritici of wheat is a major biotic stress with rapid epidemics. Host-plant resistance is one of major breeding strategies in development of resistant cultivars, wheat germplasm showing great genetic diversity for resistance was screened for identifying potential resources for major and minor resistance genes. Forty-seven germplasms of advanced breeding materials were selected and seedling reaction test was conducted on germplasm to know potential race specific resistance against Pst stripe rust races. Relative susceptibility index assessed based on seedling infection type and their numerical response values. Adult plant screening under natural epiphytotic conditions recorded different quantitative disease parameter values viz., area under the disease progress curve (AUDPC), average coefficient of infection (ACI) and relative resistance index (RRI) which helps in categorising germplasm into durable non-specific ones. The phenotypic assessment of germplasm which was categorised as resistant germplasm, was validated through simple sequence repeat (SSR) markers for Yr race specific genes such as Yr5, YR10 and Yr15 using different SSR markers viz., Xgmw501, Brac349, Xpsp300, Xgmw273 and Gms413. The gene Yr5 was postulated in 14 germplasm lines, Yr15 in 14 germplasm lines and Yr10 in 11 germplasm lines. Four germplasm postulated with Yr5+Yr15, six germplasm postulated with Yr15+Yr10 and Yr5+Yr10 postulated in three germplasm and two germplasm showed immune response with other race specific resistance.

References

  1. 1. Clarke D, Hess TM, Haro-Monteagudo D, Semenov M, Knox JW. Assessing future drought risks and wheat yield losses in England. Agric For Meteorol. 2021;297:108248. https://doi.org/10.1016/j.agrformet.2020.108248
  2. 2. Lyon B, Broders K. Impact of climate change and race evolution on the epidemiology and ecology of stripe rust in central and eastern USA and Canada. Can J Plant Pathol. 2017;39:385–92. https://doi.org/10.1080/07060661.2017.1368713
  3. 3. Hu X, Cao S, Cornelius A, Xu X. Predicting overwintering of wheat stripe rust in central and northwestern China. Plant Dis. 2020;104:44–51. https://doi.org/10.1094/PDIS-06-19-1148-RE
  4. 4. Figlan S, Ntushelo K, Mwadzingeni L, Terefe T, Tsilo TJ, Shimelis H. Breeding wheat for durable leaf rust resistance in Southern Africa: variability, distribution, current control strategies, challenges and future prospects. Front Plant Sci. 2020;11:536249. https://doi.org/10.3389/fpls.2020.00549
  5. 5. Feng J, Wang M, See DR, Chao S, Zheng Y, Chen X. Characterization of novel gene Yr79 and additional QTLs for stripe rust resistance in wheat PI 182103. Phytopathology. 2018;108:737–47. https://doi.org/10.1094/PHYTO-11-17-0375-R
  6. 6. Kokhmetova A, Rsaliyev A, Malysheva A, Atishova M, Kumarbayeva M, Keishilov Z. Identification of stripe rust resistance genes in wheat cultivars from Kazakhstan. Plants. 2021;10:2303. https://doi.org/10.3390/plants10112303
  7. 7. Singh RP, Hodson DP, Jin Y, Lagudah ES, Ayliffe MA, Bhavani S, et al. Emergence and spread of new races of wheat stem rust fungus. Phytopathology. 2015;105:872–84. https://doi.org/10.1094/PHYTO-01-15-0030-FI
  8. 8. Bhardwaj SC, Singh GP, Gangwar OP, Prasad P, Kumar S. Status of wheat rust research and management in India. Agronomy. 2019;9:892.
  9. 9. Dalio RJ, Magalhaes DM, Rodrigues CM, Arena GD, Oliveira TS, Souza-Neto RR, et al. PAMPs, PRRs, effectors and R-genes in citrus–pathogen interactions. Ann Bot. 2017;119:749–74. https://doi.org/10.1093/aob/mcw238
  10. 10. Sorensen CK, Labouriau R, Hovmøller MS. Temporal and spatial variability in rust–wheat interaction. Front Plant Sci. 2017;8:254526. https://doi.org/10.3389/fpls.2017.00484
  11. 11. Chemayek B. Studies on resistance to biotic and abiotic stresses in wheat [thesis]. Sydney: The University of Sydney. 2016.
  12. 12. Srinivas K, Rahman SM, Yadav M, Sharma M. Brown and yellow rust of wheat in India: significance of climate on its races and resistance. Int J Environ Clim Chang. 2021;11(11):72–91. https://doi.org/10.9734/ijecc/2021/v11i1130517
  13. 13. Singh RP, Srivastava P, Sharma A, Bains N. Residual resistance in wheat cultivar PBW 343 against stripe rust. J Crop Improv. 2017;31:183–91.
  14. 14. Pannu P. Scenario of wheat diseases and management strategies. Plant Dis Res. 2023;38:1–10. https://doi.org/10.5958/2249-8788.2023.00001.X
  15. 15. Yaniv E, Raats D, Ronin Y, Korol AB, Grama A, Bariana H, et al. Marker-assisted selection for Yr15 gene in wheat. Mol Breed. 2015;35:1–12. https://doi.org/10.1007/s11032-015-0238-0
  16. 16. Zhu Z, Cao Q, Han D, Wu J, Wu L, Tong J, et al. Molecular characterization of Yr86 gene in wheat. Theor Appl Genet. 2023;136:142. https://doi.org/10.1007/s00122-023-04374-2
  17. 17. Haider MW, Kaur J, Bala R, Singh S, Srivastava P, Sharma A, et al. Stripe rust resistance gene postulation using molecular markers. Sci Rep. 2023;13:9007. https://doi.org/10.1038/s41598-023-36197-y
  18. 18. Moll E, Flath K, Tessenow I. Evaluation of the resistance of cereal assortments: Planning and analysis of experiments using the SAS application RESI 2. Berichte aus dem Julius Kühn-Institut. 2010;154. https://doi.org/10.5073/20161208-101713
  19. 19. Arya L, Shal MN, Niranjana M, Jha S, Patial M, Saharan M, et al. Resistance genes against yellow rust in Triticum spelta. Genome. 2025;68:1–11. https://doi.org/10.1139/gen-2024-0171
  20. 20. Chen X, Kang Z. Introduction to stripe rust research. In: Chen X, Kang Z, editors. Stripe rust. Dordrecht: Springer; 2017. p. 1–33. https://doi.org/10.1007/978-94-024-1111-9_1
  21. 21. Bhardwaj AK, Zenone T, Jasrotia P, Robertson GP, Chen J, Hamilton SK. Water and energy footprints of bioenergy crops. Glob Change Biol Bioenergy. 2011;3:208–22. https://doi.org/10.1111/j.1757-1707.2010.01074.x
  22. 22. Gangwar OP, Kumar S, Bhardwaj SC, Prasad P, Lata C, Adhikari S. Population structure of Puccinia striiformis in India. Phytopathology. 2022;112:1444–53. https://doi.org/10.1094/PHYTO-10-21-0422-R
  23. 23. Riaz A, Periyannan S, Aitken E, Hickey L. Rapid phenotyping for leaf rust resistance. Plant Methods. 2016;12:1–10. https://doi.org/10.1186/s13007-016-0117-7
  24. 24. Zetzsche H, Serfling A, Ordon F. Breeding progress in rust resistance in wheat. Crop Breed Genet Genomics. 2019;1:1–10. https://doi.org/10.1038/s41598-020-77200-0
  25. 25. Ravishankar L, Pandey MK, Dey T, Singh A, Rasool B, Diskit S, et al. Durable resistance in wheat against stripe rust. J Biobased Mater Bioenergy. 2024;18:710–20. https://doi.org/10.1166/jbmb.2024.2407
  26. 26. Vaibhav K, Singh G, Singh P, Harikrishna R, Gogoi R. Slow rusting resistance in wheat germplasm. Indian Phytopathol. 2017;70:52–7.
  27. 27. Akhtar MA, Ahmad I, Iftikhar, Mirza JI, Rattu AR, Ul Haq E, Hakro AA, Jaffry AH. Evaluation of candidate lines against stripe and leaf rusts under National Uniform Wheat and Barley Yield Trial 2000-2001. Asian J Plant Sci. 2002;1:450–3.
  28. 28. Mahmoud AF, Hassan MI, Amein KA. Resistance potential of wheat genotypes under Egyptian climate conditions. Plant Pathol J. 2015;31:402. https://doi.org/10.5423/PPJ.OA.12.2014.0127
  29. 29. Mekonnen MA, Admasu MA, Hei NB. Stem rust resistance in durum wheat. Curr Res Agric Sci. 2019;6:141–56. https://doi.org/10.18488/journal.68.2019.62.141.156
  30. 30. Rani R, Singh R, Yadav NR. Evaluating stripe rust resistance in Indian wheat genotypes and breeding lines using molecular markers. C R Biol. 2019;342:154–74. https://doi.org/10.1016/j.crvi.2019.04.002
  31. 31. Elkot A, Abd El-Aziz MH, Aldrussi I, El-Maghraby M. Molecular identification of rust resistance genes. Ass J Agric Sci. 2016;47:124–35. https://doi.org/10.21608/ajas.2016.923
  32. 32. Kariyawasam GK, Carter AH, Rasmussen JB, Faris J, Xu SS, Mergoum M, et al. Genetic relationships in wheat pathosystem. Theor Appl Genet. 2016;129:897–908. https://doi.org/10.1007/s00122-016-2670-x
  33. 33. Zheng S, Li Y, Lu L, Liu Z, Zhang C, Ao D, et al. Contribution of Yr genes in wheat breeding. Euphytica. 2017;213:1–16. https://doi.org/10.1007/s10681-016-1828-6
  34. 34. Shahin A, Esmaeil RA, Badr M, Abdelaal K, Hassan FA, Hafez YM. Phenotypic characterization of rust resistance. Fresenius Environ Bull. 2021;30:6223–36.
  35. 35. Sun Q, Wei Y, Ni Z, Xie C, Yang T. Microsatellite marker for Yr5 gene in wheat. Plant Breed. 2002;121:539–41. https://doi.org/10.1046/j.1439-0523.2002.00754.x
  36. 36. Prashar M, Bhardwaj SC, Jain SK, Gangwar OP. Virulence diversity of Puccinia striiformis in India. Indian Phytopathol. 2015;68:129–33.
  37. 37. Khan QK, Mumtaz AS, Khurshid HK, Jan SA, Ahmad NA, Khan SA, et al. Durable resistance against leaf rust in wheat germplasm. Pakistan J Phytopathol. 2018;30:1–10.
  38. 38. Randhawa M, Bansal U, Lillemo M, Miah H, Bariana H. Rust resistance genes in Nordic wheat. J Appl Genet. 2016;57:453–65. https://doi.org/10.1007/s13353-016-0345-6
  39. 39. Riaz A, Athiyannan N, Periyannan S, Afanasenko O, Mitrofanova O, Aitken EA, et al. Adult plant resistance in wheat. Plant Dis. 2017;101:317–23. https://doi.org/10.1094/PDIS-05-16-0614-RE
  40. 40. Rizwan S, Iftikhar A, Kazi AM, Sahi GM, Mirza JI, Attiq-ur-Rehman, et al. Virulence variation in stripe rust pathogen. Arch Phytopathol Plant Prot. 2010;43:875–82. https://doi.org/10.1080/03235400802075542
  41. 41. Milne RJ, Dibley KE, Schnippenkoetter W, Mascher M, Liu AC, Wang L, et al. Lr67 gene confers resistance in barley. Plant Physiol. 2019;179:1285–97. https://doi.org/10.1104/pp.18.00945
  42. 42. Milus EA, Kristensen K, Hovmøller MS. Increased aggressiveness in stripe rust pathogen. Phytopathology. 2009;99:89–94. https://doi.org/10.1094/PHYTO-99-1-0089
  43. 43. Moore JW, Herrera-Foessel S, Lan C, Schnippenkoetter W, Ayliffe M, Huerta-Espino J, et al. A recently evolved hexose transporter variant confers resistance to multiple pathogens in wheat. Nat Genet. 2015;47:1494–98. https://doi.org/10.1038/ng.3439

Downloads

Download data is not yet available.