South Western Ghats of India: A niche of clove (Syzygium aromaticum (L.) Merr. & Perry) diversity

Authors

  • G S Sreekala Department of Plantation, Spices, Medicinal and Aromatic Crops, College of Agriculture, Vellayani, Kerala Agricultural University, Trivandrum, Kerala 695522, India https://orcid.org/0000-0001-5661-048X
  • M Avinash Department of Department of Plantation, Spices, Medicinal and Aromatic Crops, College of Horticulture, University of Horticultural Sciences, Bagalkot, Karnataka 587104, India https://orcid.org/0009-0002-2638-3292
  • J B Reddappa Department of Plantation, Spices, Medicinal and Aromatic Crops, College of Agriculture, Vellayani, Kerala Agricultural University, Trivandrum, Kerala 695522, India https://orcid.org/0009-0001-3622-5426
  • P Reshma Department of Plantation, Spices, Medicinal and Aromatic Crops, College of Agriculture, Vellayani, Kerala Agricultural University, Trivandrum, Kerala 695522, India https://orcid.org/0000-0001-8971-949X
  • J Nainu Department of Plantation, Spices, Medicinal and Aromatic Crops, College of Agriculture, Vellayani, Kerala Agricultural University, Trivandrum, Kerala 695522, India https://orcid.org/0009-0008-0979-7657
  • T Anargha Department of Plantation, Spices, Medicinal and Aromatic Crops, College of Agriculture, Vellayani, Kerala Agricultural University, Trivandrum, Kerala 695522, India https://orcid.org/0000-0002-4360-2656

DOI:

https://doi.org/10.14719/pst.3405

Keywords:

clove, cluster analysis, principal component analysis, South Western Ghats, Syzygium aromaticum, minimum data set

Abstract

The survey conducted across major clove (Syzygium aromaticum (L.) Merr. & Perry) growing regions of the South Western Ghats of India, especially in the states of Kerala and Tamil Nadu, identified thirty accessions with distinct characteristics and superior yield. Clove accessions were characterized based on twenty-one qualitative and twelve quantitative traits. Significant variations were observed among fifteen qualitative characters with predominant traits including elliptical canopy shape, semi-erect branching pattern, leaf lamina and its apex, mid-bud forming season, clustering pattern of flower, bud size, fruit, and seed shape. The dendrogram constructed using the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) grouped thirty accessions into five major clusters at a genetic similarity of 73%, with Accession 19 identified as unique. Principal component analysis of twelve quantitative characters revealed three component groups, explaining 70.85% of the total variance. The score plot generated from the principal component loading grouped the accessions into eighteen clusters. A minimal dataset comprising four characters, namely plant height, canopy spread in East-West direction, number of inflorescences per square meter, and mature bud length, was generated. Observations on both qualitative traits and the minimum data set facilitated the identification of ideotypes. The geographical location was not found to influence genetic diversity significantly.

Downloads

Download data is not yet available.

References

Alfian A, Mahulette AS, Zainal M, Hardin, Bahrun AH. Morphological character of raja clove (Syzygium aromaticum L. Merr & Perry.) native from Ambon Island. IOP Conf Ser: Earth Environ. Sci. 2019; 343(1): 012150. https://doi.org/10.1088/1755-1315/343/1/012150

Hariyadi, Mahulette AS, Yahya S, Wachjar A. Agro-morphologies and physicochemical properties of flower bud, stem and leaf oils in two clove varieties (Syzygium aromaticum L. Merr. and Perry.) originated from Ambon island. Chiang Mai Univ. J. Nat. Sci. 2020;19: 516-530. https://doi.org/10.12982/CMUJNS.2020.0034

Mahulette AS, Hariyadi, Yahya S, Wachjar A, Alfian A. Morphological traits of Maluku native forest clove (Syzygium aromaticum L. Merr & Perry.). J. Trop. Crop Sci. 2019a; 6: 105-111. https://doi.org/10.29244/jtcs.6.02.105-111

Mahulette AS, Riry J, Kesaulya H, Kembauw, E, Lawalata IJ, Wattimena AY, Makaruku MH, Alfian A. Essential oil components of forest clove variants from Ambon Island, Maluku. IOP Conf Ser: Earth Environ Sci. 2021; 883: 012002. https://doi.org/10.1088/1755- 1315/883/1/012002.

Mahulette AS, Alfian A, Suyadi S, Supriyanto S, Situmorang J, Matatula AJ, Kilkoda AK, Nendissa JI, Wattimena AY. Type and morphological character of local clove (Syzygium aromaticum) from Maluku, Indonesia. Biodivers. J. 2022; 23:1301-1309. https://doi.org/ 10.13057/biodiv/d230314.

Sundari, Nurhasanah, Mas'ud A, Amin M, Arumingtyas EL, Azrianingsih R. Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data. Biodiversitas 2019; 20:1510-1515. https://doi.org/10.13057/biodiv/d200604.

Ravindran PN. Advances in spice research- History and Achievements of Spice Research in India Since Independence. In: Ravindran PN, Nirmal Babu K, Shiva KN, Kallupurackal JA, editors.2006. Agrobios, Jodhpur

Rojas CDF, de Souza CR, Oliveira WP. Clove (Syzygium aromaticum): a precious spice. Asian Pac. J. Trop. Biomed. 2014; 4:90-96. https://doi.org/10.1016/S2221-1691(14)60215-X

Kumar U, Kumar B, Bhandhari A, Kumar Y. Phytochemical investigation and comparison of antimicrobial screening of clove and cardamom. Int. J. Pharm. Sci. Res. 2010; 1:138-147. http://dx.doi.org/10.13040/IJPSR.0975-8232.1(12).138-47

Kasai H, Shirao M, Ikegami-Kawai M. Analysis of volatile compounds of clove (Syzygium aromaticum) buds as influenced by growth phase and investigation of antioxidant activity of clove extract. Flavour Fragr. J. 2016; 31:178-184. https://doi.org/10.1002/ffj.3299

Khan MS, Zahin M, Hasan S, Husain FM. Inhibition of quorum sensing regulated bacterial functions by plant essential oils with special reference to clove oil. Lett Appl. Microbiol. 2009; 49:354-360. 10.1111/j.1472-765X.2009.02666.x.

Marya CM, Satija G, Avinash J, Nagpal R, Ahmad A. In vitro inhibitory of clove essential oil and its two active principles on tooth decalcification by apple juice. International Journal of Dentistry. 2012 http://dx.doi.org/10.1155/2012/759618.

Matta FB. Essential oils from six herbal plants for biocontrol of the maize weevil. Hort. Science. 2010; 45:592-598.

Xu JG, Liu T, Hu QP, Cao XM. Chemical composition, antibacterial properties and mechanism of action of essential oil from clove buds against Staphylococcus aureus. Molecules. 2016; 21:1-13. doi: 10.3390/molecules21091194.

Food and Agriculture Organization. Food and agriculture data. 2022. [Internet]. 2022 [cited 19 March 2023].https://www.fao.org/faostat/en/#data/QCL

Spices Board. Major spice state wise area production 2021[Internet]. 2022 [cited 5 Jan 2023]. [http://www.indianspices.com/sites/default/files/majorspicestatewise2021.pdf.

Nybe EV, Miniraj N, Peter KV. Tree Spices. In: Peter KV editor Spices- Horticultural Science Series 5. New India Publishing Agency, NewDelhi, 2006; 587-650.

Blakrishnamoorthy G and Kennedy RR. 1999. Improved technique in tree spice cultivation.Spice India 9:8-13.

Mahulette AS, Hariyadi, Yahya S, Wachjar A, Marzuki I. Morphoagronomical diversity of forest clove in Moluccas, Indonesia. Hayati. J. Biosci. 2019b; 26(4):156-162. https://doi.org/10.4308/hjb.26.4.156

Yuliana I, Waluyo B, Ashari S. Variation in morphological traits of a selection of Indonesian winged bean accessions (Psophocarpus tetragonolobus) and its analysis to assess genetic diversity among accessions. Biodiversitas 2020; 2:2991-3000. https://doi. org/10.13057/biodiv/d210716.

Krishnamoorthy B, Rema J. Three promising morphological variants in clove (Syzygium aromaticum) (L.). Merr. & Perry) from Tamil Nadu, India. J. Spices Aromat. Crops. 1994;3: 168-169.

Balakrishnamoorthy G, Kennedy RR. Improved technique in tree Spices cultivation. Horticultural Research Station, Yercaud, Tamilnadu Agricultural University. 1999.

International Plant Genetic Resource Institute, Descriptors for Mangosteen (Garcinia mangostana). 2003; (cited 10 January 2017) https://www.bioversityinternational.org/e-library/ publications/ detail/ descriptors-for-mangosteen-garcinia-mangostana/

Protection of Plant Varieties and Farmers Right Authority, Crop DUS guidelines [Internet]. 2012 [cited 5 January 2017]. http://plantauthority.gov.in/crop-guidelines.html.

Vikram, H.C.Characterization and Evaluation of Nutmeg (Myristica fragrans Houtt.). [Dissertation]. Kerala Agricultural University, Thrissur, Kerala 2016.

Maiti R, Rodriguez HG, Kumari A, Diaz JCG. Perspectives of branching pattern and branching density in 30 woody trees and shrubs in Tamulipan Thornscrub, Northeast of Mexico. For. Res. 2015; 4: 270-284. https://doi.org/10.4172/2168-9776.1000160

Adu BG, Amoah RA, Aboagye LM, Aziz MGA, Boampong R. High-density DArT markers and phenotypic characterization of cowpea accessions (Vigna unguiculata (L.) Walp). Adv. Agric. 2021; 1: 1-12. https://doi.org/10.1155/2021/6336684

Ji Q, Zhu H, Huang X, Zhou K, Liu Z, Sun Y, Wang Z, Ke W. Uncovering phylogenetic relationships and genetic diversity of water dropwort using phenotypic traits and SNP markers. PloS One 2021;16: 1-16. https://doi.org/10.1371/journal.pone.0249825

Luong NH, Linh L, Shim K, Adeva C, Lee H, Ahn S. 2021. Genetic structure and geographical differentiation of traditional rice (Oryza sativa L.) from Northern Vietnam. Plants. 2021; 10: 1-20. https://doi.org/10.3390/plants10102094.

Tesfaye A. Genetic variability, heritability,and genetic advance estimatesin garlic (Allium sativum) from the Gamo Highlands of Southern Ethiopia. Intl J Agron 2021; 1: 1-8. https://doi.org/10.1155/2021/3171642.

Changizi M, Choukan R, Heravan EM, Bihamta MR, Darvish F. Evaluation of genotype× environment interaction and stability of corn hybrids and relationship among univariate parametric methods. Can. J. Plant Sci. 2014; 94: 1255–1267. doi: 10.4141/cjps2013-386

Zannat A, Hussain MA, Abdullah AHM, Hossain MI, Saifullah M, Safhi FA, Hossain MS. . Exploring genotypic variability and interrelationships among growth, yield, and quality characteristics in diverse tomato genotypes. Heliyon 2023; 9(8). 10.1016/j.heliyon.2023.e18958

Alam S, Tester M, Fiene G, Ali M, Mousa A. Early growth stage characterization and the biochemical responses for salinity stress in tomato. Plants. 2021; 1: 1-20. https://doi.org/10.3390/plants10040712.

Jin N, Jin L, Luo S, Tang Z, Liu Z, Wei S, Liu F, Zhao X, Yu J, Zhong Y. Comprehensive evaluation of amino acids and polyphenols in 69 varieties of green cabbage (Brassica oleracea L. var. capitata L.) based on multivariate statistical analysis. Molecules. 2021; 26 : 5355. https://doi.org/10.3390/molecules26175355

Kang Y, Choi YJ, Lee YR, Seo KH, Suh J, Lee H. Cut flower characteristics and growth traits under salt stress in lily cultivars. Plants. 2021(1): 1-12. https://doi.org/10.3390/ plants 10071435

Liantoni F, Prakisya NPT, Aristyagama YH, Hatta P. Comparative analysis of hierarchical clustering with improve feature for herbs leaves. J Phys: Conf Ser. 2021;1808 (1) : 1-11. https://doi.org/10.1088/1742- 6596/1808/1/012025

Loukili ELH, Abrigach F, Bouhrim M, Bnouham, M, Fauconnier M, Ramdani M. Chemical composition and physicochemical analysis of Opuntia dillenii extracts grown in Morocco. J Chem 2021;1:1-11. https://doi.org/10.1155/2021/8858929

Rathinavel K. Principal component analysis with quantitative traits in extant cotton varieties (Gossypium hirsutum L.) and parental lines for diversity. Curr. Agric. Res. J. 2018; 6: 54-64. https://doi.org/10.12944/CARJ.6.1.07.

Zhang R. Characterization of morphological and fruit quality traits of coconut (Cocos nucifera L.) germplasm. Hortic. Sci. 2021; 56: 961-969. https://doi.org/10.21273 /HORT SCI15887-21.

Bhattarai U, Subudhi PK. Genetic diversity, population structure, and marker-trait association for drought tolerance in US rice germplasm. Plants. 2019; 8:530. doi: 10.1016/j.heliyon.2023.e18958

Tanwar J, Sharma S, Jakhar P, Kumar G, Vikas VK, Shailendra KJ, Jyoti K. Cluster analysis in emmer wheat germplasm using quantitative traits. Biol. Forum. 2023; 15(2): 556-560.

Mazumdar D, Chatterjee AK, Barik AK, Datta A, Bera R, Seal A. Minimum data set and principle component analysis to assess Inhana rational farming (IRF) in terms of soil quality development leading to crop response a case study from FAO-CFC-TBI project on organic tea cultivation in Maud TE, Assam, India. Int. J. Innov. Res. Educ. Sci. 2014; 1(2):2349-5219.

Published

30-12-2024 — Updated on 01-01-2025

Versions

How to Cite

1.
Sreekala GS, Avinash M, Reddappa JB, Reshma P, Nainu J, Anargha T. South Western Ghats of India: A niche of clove (Syzygium aromaticum (L.) Merr. & Perry) diversity. Plant Sci. Today [Internet]. 2025 Jan. 1 [cited 2025 Jan. 6];12(1). Available from: https://horizonepublishing.com/journals/index.php/PST/article/view/3405

Issue

Section

Research Articles

Most read articles by the same author(s)

Similar Articles

You may also start an advanced similarity search for this article.