Genotype trait analysis to identify potential resistant types to root knot nematode in tomato (Solanum lycopersicum L.)
DOI:
https://doi.org/10.14719/pst.4205Keywords:
cluster, GT Biplot, hybrid, peroxidase, tomato, yieldAbstract
Six F1 hybrids were tested for nematode resistance along with their parents and commercial cultivars for two seasons and the pooled mean results were analysed to explore the genetic potential of traits linked to specific genotypes. Nine quantitative, four qualitative and six physiological parameters were analyzed to identify superior hybrids through statistical models viz., analysis of variance, GE biplot and Wards clustering. The hybrids Hisar Arun×HN2 (susceptible), Arka Abha×HN2 and LE 812×HN2 (resistant) were found to be superior for yield per plant under stressed conditions. Higher plant height was observed in IIHR 2868 (86.21cm), primary branch in Arka Abha×HN2 (5.68) and shorter root length in Hisar Lalith (16 cm). Resistant hybrids exhibited earlier flowering i.e., 25 days and less fruit number. The susceptible genotypes expressed lower fruit number (17-20 fruits) on the contrary resistant hybrids had more than 20 fruits. The yield ranged between 667 g in CLN2123A to 1189 g in Hisar Arun×HN2. Under stressed conditions, the resistant hybrids Arka Abha×HN2 and LE 812×HN2 produced yields of 1169 g and 1153 g, respectively. Genotype Trait Biplot revealed that the PC1 and PC2 had contributed 70 % to the total variance and positive contributions to parents and hybrids were capped. The hybrids LE 812×HN2 and Arka Abha×HN2 can be well utilized in root knot nematode infested fields. The contribution of parents and its hybrids, associated traits and their interrelationships provide new dimension for the breeders to select trait specific parents and hybrids for crop improvement programs.
Downloads
References
Rick C. Origin of cultivated tomato, current status of the problem. Abstract XI International Botanical Congress. 1969.
Osekita OS, Ademiluyi AT. Genetic advance, heritability and character association of component of yield in some genotypes of tomato (Lycopersicon esculentum Mill.) Wettsd. Acad J Biotech. 2014;2(1):6-10. DOI: http://dx.doi.org/10.15413/ajb.2013.0118
Van-Dam B, Nagesh M, Naika S. Cultivation of tomato: Production, processing and marketing: Agromisa foundation and CTA, Wageningen, 2005. DOI: https://www.agromisa.org/wp-content/uploads/Agrodok-17-Cultivation-of-tomato_sample.pdf
Meena OP, Bahadur V. Genetic associations analysis for fruit yield and its contributing traits of indeterminate tomato (Solanum lycopersicum L.) germplasm under open field condition. J Agric Sci. 2015;7(3):148. URL: http://dx.doi.org/10.5539/jas.v7n3p148
Ibrahim IKA. Diseases and pests of vegetable crops and control methods. Monshaat Al-Maarf Publisher, Alexandria, Egypt. 2006.
Kalaiarasan P. Biochemical markers for identification of root knot nematode (Meloidogyne incognita) resistance in tomato. Karnataka J Agric Sci. 2009;22(3):471-75.
Rawal S. A review on root-knot nematode infestation and its management practices through different approaches in tomato. Tropical Agroecosystems. 2020;1(2):92-96. DOI: http://doi.org/10.26480/taec.02.2020.92.96
Chen S, Zou Y, Tong X, Xu C. A tomato NBS-LRR gene Mi-9 confers heat-stable resistance to root-knot nematodes. Journal of Integrative Agriculture. 2024; https://doi.org/10.1016/j.jia.2024.07.017.
Mahfouz MM, Abd-Elgawad. Optimizing biological control agents for controlling nematodes of tomato in Egypt. Egyptian Journal of Biological Pest Control. 2020;30:58. https://doi.org/10.1186/s41938-020-00252-x
Kouamé AP, Kouakou YYFR, Coulibaly KE, Séka K, Fofana F, Diallo HA. Effectiveness of garlic and onion aqueous extracts on tomato root-knot nematodes (Meloidogyne sp.) in the autonomous district of Yamoussoukro in Central Côte d’Ivoire. Ind J Pure App Biosci. 2021;9(1):24-35. https://doi.org/10.18782/2582-2845.8532
Thakura V, Sharma A, Rana RS, Kumar P. A status-quo review on management of root knot nematode in tomato The Journal of Horticultural Sciences and Biotech. 2022;97(4):403-16. https://doi.org/10.1080/14620316.2022.2034531
Evgenidis G, Traka-Mavrona E, Koutsika-Sotiriou M. Principal component and cluster analysis as a tool in the assessment of tomato hybrids and cultivars. Int J Agron. 2011;e697879. doi: https://doi.org/10.1155/2011/697879
Atugwu AI, Okechukwu EC, Onyia VN, Chukwu C, Ede VN. Studies on adaptability of advanced generations of wild and cultivated tomato crosses in a humid environment. Researchjournali’s J Agri. 2019;6(7):1-13. https://researchjournali.com/pdf/5209.pdf
Rehman F, Saeed A, Yaseen M, Shakeel A, Ziaf K, Munir H, et al. Genetic evaluation and characterization using cluster heat map to assess NaCl tolerance in tomato germplasm at the seedling stage. Chil J Agric Res. 2019;79(1):56-65. https://www.researchgate.net/publication/330620275
Ene CO, Abtew WG, Oselebe HO, Ozi FU, Ikeogu UN. Genetic characterization and quantitative trait relationship using multivariate techniques reveal diversity among tomato germplasms. Food Sci Nutr. 2022;10(7):2426-42. DOI: https://doi.org/10.1002/fsn3.2850
Srivastava RP, Kumar S. Fruit and vegetable preservation: principles and practices. International Book Distribution Company. 2006;Vol. 353-64.
AOAC. Official methods of analysis. Association of Official Analytical Chemists. Washington. 1975.
Arnon DI. Copper enzymes in isolated chloroplasts. Polyphenoloxidse in Beta vulgaris. Plant Physiol. 1949;24:1-15. https://doi.org/10.1104/pp.24.1.1
Bray H, Thorpe W. Analysis of phenolic compounds of interest in metabolism. Methods of Biochemical Analysis. 1954;27-52. https://doi.org/10.1002/9780470110171.ch2
Srivastava S. Peroxidase and poly?phenol oxidase in Brassica juncea plants infected with Macrophomina phaseolina (Tassai) Goid. and their implication in disease resistance. J Phytopathol. 1987;120(3):249-54. https://doi.org/10.1111/j.1439-0434.1987.tb04439.x
Sadasivam S, Manickam A. Biochemical methods. (2nd Edn). New Age International Publishers, New Delhi. 1997.
Dickerson D, Pascholati S, Hagerman AE, Butler L, Nicholson R. Phenylalanine ammonia-lyase and hydroxycinnamate: CoA ligase in maize mesocotyls inoculated with Helminthosporium maydis or Helminthosporium carbonum. Physiol Plant Pathol. 1984;25(2):111-23. https://doi.org/10.1016/0048-4059(84)90050-X
Wolf JB, Wade MJ. What are maternal effects (and what are they not). Philosophical Transactions of the Royal Society B. Biol Sci. 2009;364(1520):1107-15. https://doi.org/10.1098/rstb.2008.0238
Shankar A, Reddy R, Sujatha M, Pratap M. Combining ability and gene action studies for yield and yield contributing traits in tomato (Solanum lycopersicum L.). Helix. 2013;6:431-35. https://www.researchgate.net/publication/331165090
Ali A, Hasnin NM, Mahmoud A, Kesba H. Evaluation of some tomato genotypes to Meloidogyne incognita resistance. Am Eurasian J Agric Environ Sci. 2015;15(7):1402-10.
https://www.researchgate.net/publication/281408364
Strajnar P, Širca S, Urek G, Šircelj, Helena Ž, Peter Z. Effect of Meloidogyne ethiopica parasitism on water management and physiological stress in tomato. European J Plant Pathol. 2012;132:49-57. DOI: 10.1007/s10658-011-9847-6. https://www.researchgate.net/publication/250928897
Okporie E, Chukwu S, Onyishi G. Influence of plant Age, tomato variety and nematode inoculum density on pathogenicity of Meloidogyne incognita on tomato in Abakaliki agro-ecology. J Agric Vet Sci. 2014;7(1):45-50. https://www.researchgate.net/publication/314437534
Abad P, Favery B, Rosso MN, Castagnone-Sereno P. Root-knot nematode parasitism and host response:molecular basis of a sophisticated interaction. Mol Plant Pathol. 2003;4:217-24. https://doi.org/10.1046/j.1364-3703.2003.00170.x
Saleem MY, Asghar M, Iqbal Q, Rahman A, Akram M. Diallel analysis of yield and some yield components in tomato (Solanum lycopersicum L.). Pak J Bot. 2013;1247-50. https://www.researchgate.net/publication/260555729
Sundharaiya K, Karuthamani M. Evaluation of tomato hybrids for resistance to root knot nematode (Meloidogyne incognita). Int J Agric Sci. 2018;14(1):76-84. 10.15740/HAS/IJAS/14.1/76-84
Anand M, Sankari A. Studies on per se performance and combining ability in tomato under Coimbatore condition. Asian J Hort. 2015;10(1):105-12. DOI:10.15740/HAS/TAJH/10.1/105-112
Muños S, Cazettes C, Fizames C, Gaymard F, Tillard P, Lepetit M, et al. Transcript profiling in the chl1-5 mutant of Arabidopsis reveals a role of the nitrate transporter NRT1.1 in the regulation of another nitrate transporter, NRT2.1. Plant Cell. 2004;16:2433-47. https://www.researchgate.net/publication/8393087
Marsic NK, Gasperlin L, Abram V, Budic M, Vidrih R. Quality parameters and total phenolic content in tomato fruits regarding cultivar and microclimatic conditions. Turk J Agr Forest. 2022;35(2):185-94. DOI:. https://www.researchgate.net/publication/267033089
Rani C, Veeraragavathatham D, Sanjutha S. Analysis on biochemical basis of root knot nematode (Meloidogyne incognita) resistance in tomato (Lycopersicon esculentum Mill.). Res J Agric and Biol Sci. 2008;4:866-70. https://www.researchgate.net/publication/305812018
Hammerschmidt R, Kuc J. Induced resistance to diseases in plants In : Vol. 4, Springer Science and Bussiness Media; 2013.
Dagade S, Dhaduk L, Hariprasanna K, Mehata D, Bhatt V, Barad A. Parent offspring relations of nutritional quality traits in 8 x 8 partial diallel cross of fresh tomatoes. Int J Appl Biol Pharm. 2015;6(2):45-55. https://www.fortunejournals.com/ijabpt/pdf/48007-S.%20B.%20Dagade.pdf
Sundharaiya K, Jansirani P, Karuthamani M. Studies on challenge inoculation for combined resistance to tomato leaf curl virus and root knot nematode in tomato (Solanum lycopersicum L.). Int J Curr Microbiol App Sci. 2018;6:179-88. https://www.ijcmas.com/special/6/K.%20Sundharaiya,%20et%20al.pdf
Kumar PA, Reddy KR, Reddy R, Rao S. Comparative performance of dual purpose tomato hybrids for yield and processing traits. J Pharmacogn Phytochem. 2018;7(1):828-35. https://www.researchgate.net/publication/322888209
Raju K, Prabhakar B, Kumar S, Reddy R. Per se performance and correlation studies in F1 generation of tomato (Solanum lycopersicum Mill.). J Res ANGRAU. 2012;40(3):58-63. https://www.researchgate.net/publication/339943464
Brejda JJ, Moorman TB, Karlen DL, Dao TH. Identification of regional soil quality factors and indicators. I. Central and Southern high plains. Soil Sci Soc Am J. 2000;64:2115-24. https://doi.org/10.2136/sssaj2000.6462115x
Ibrahim M, El-Mansy AB. Screening of tomato genotypes under high temperature in North Sinai. J Plant Prod Mansoura Univ. 2021;12(2):161-69. https://www.researchgate.net/publication/349982733
Sinha A, Singh P, Bhardwaj A, Verma RB. Principal component analysis approach for comprehensive screening of tomato germplasm for polyhouse condition. J Exp Agric Int. 2021;43(9):67-72. https://www.researchgate.net/publication/355776131
Hussain I, Khan SA, Ali S, Farid A, Ali N, Ali S, et al. Genetic diversity among tomato accessions based on agro-morphological traits. Sains Malays. 2018;47(11):2637-45. https://www.researchgate.net/publication/329747369
Sehgal N, Chadha S, Kumar S, Ravita. Variability and traits association analyses in bacterial wilt resistant F4 progenies of tomato, Solanum lycopersicum L. for yield and biochemical traits. Indian J Exp Biol. 2021;59:617-25. https://or.niscpr.res.in/index.php/IJEB/article/view/3566/1279
Nankar AN, Tringovska I, Grozeva S, Ganeva D, Kostova D. Tomato phenotypic diversity determined by combined approaches of conventional and high-throughput tomato analyzer phenotyping. Plants. 2020;9:197. https://www.researchgate.net/publication/339054220
Shukla S, Bhargava A, Chatterjee A, Pandey AC, Mishra BK. Diversity in phenotypic and nutritional traits in vegetable amaranth (Amaranthus tricolor L.), a nutritionally under?utilized crop. J Sci Food Agric. 2010;90(1):139-44. DOI: 10.1002/jsfa.3797
Nevani S, Sridevi O. Correlation and path analysis in tomato. Pharm Innov Int J. 2021;10(7):1522-25. https://www.thepharmajournal.com/archives/2021/vol10issue7/PartT/10-7-217-909.pdf
Bhonwong A, Stout MJ, Attajarusit J, Tantasawat P. Defensive role of tomato polyphenol oxidases against cotton bollworm (Helicoverpa armigera) and beet armyworm (Spodoptera exigua). J Chem Ecol. 2009;35:28-38. DOI: 10.1007/s10886-008-9571-7
Thipyapong P, Melkonian J, Wolfe DW, Steffens JC. Suppression of polyphenol oxidases increases stress tolerance in tomato. Plant Sci. 2004;167:693-703. https://doi.org/10.1016/j.plantsci.2004.04.008
Tran HT, Hurley BA, Plaxton WC. Feeding hungry plants: the role of purple acid phosphatases in phosphate nutrition. Plant Sci. 2010;179:14-27. https://www.researchgate.net/publication/222670157
Dey P, Santhi R, Maragatham S, Sellamuthu KM. Status of phosphorus and potassium in the Indian soils vis-à-vis world soils. Ind J Fert. 2017;13(4):44-59. https://www.researchgate.net/publication/316086948
Margalef O, Sardans J, Fernández-Martínez M, Molowny-Horas R, Janssens IA, Ciais P, et al. Global patterns of phosphatase activity in natural soils. Sci Rep. 2017;7:1337. DOI:10.1038/s41598-017-01418-8
Sun CX, Liu ZG, Jing YD. Effects of water stress on the activity and isoenzyme of key defense Enzymes in maize leaves. J Maize Sci. 2018;11:63-66.
Downloads
Published
How to Cite
Issue
Section
License
Copyright (c) 2025 R P Kamalkumaran, R Arunkumar, K Kumanan, S Muthuramalingam, M Anand , M Velmurugan
This work is licensed under a Creative Commons Attribution 4.0 International License.
Copyright and Licence details of published articles
Authors who publish with this journal agree to the following terms:
- Authors retain copyright and grant the journal right of first publication with the work simultaneously licensed under a Creative Commons Attribution License that allows others to share the work with an acknowledgement of the work's authorship and initial publication in this journal.
- Authors are able to enter into separate, additional contractual arrangements for the non-exclusive distribution of the journal's published version of the work (e.g., post it to an institutional repository or publish it in a book), with an acknowledgement of its initial publication in this journal.
Open Access Policy
Plant Science Today is an open access journal. There is no registration required to read any article. All published articles are distributed under the terms of the Creative Commons Attribution License (CC Attribution 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited (https://creativecommons.org/licenses/by/4.0/). Authors are permitted and encouraged to post their work online (e.g., in institutional repositories or on their website) prior to and during the submission process, as it can lead to productive exchanges, as well as earlier and greater citation of published work (See The Effect of Open Access).